Synthesis and Characterization of New Oxime Ligand and Its Cu(II) Complex: DFT Calculations, in Vitro Antibacterial Activity, Drug-Likeness Properties, and Molecular Docking Studies

IF 0.7 4区 化学 Q4 CHEMISTRY, PHYSICAL
Seda Alkan, Tufan Topal, Emin Karapınar
{"title":"Synthesis and Characterization of New Oxime Ligand and Its Cu(II) Complex: DFT Calculations, in Vitro Antibacterial Activity, Drug-Likeness Properties, and Molecular Docking Studies","authors":"Seda Alkan,&nbsp;Tufan Topal,&nbsp;Emin Karapınar","doi":"10.1134/S003602442405025X","DOIUrl":null,"url":null,"abstract":"<p>In this study, 1,2-phenylenediamine-bis(isonitrosomethoxy-<i>p</i>-tolil keton) ligand and its Cu metal complex were synthesized and its structure was determined by spectroscopic methods. UV-visible spectra, mass and NMR spectra were investigated in chloroform. The FTIR spectra of these compounds were characterized in solid state. The geometry of the optimized ligand was calculated at 6-31G(<i>d</i>,<i>p</i>) levels by DFT/B3LYP method. The HOMO and LUMO void energies, MEP analysis, vibration analysis, geometric structure, <sup>13</sup>C-NMR and <sup>1</sup>H-NMR chemical shift calculations and other parameters of this calculated compound were obtained with the DFT/B3LYP/6-31G(<i>d</i>,<i>p</i>) basis set. The antibacterial activity of the ligand and complex was tested against gram positive and gram negative bacteria (<i>Escherichia coli</i> and <i>Staphylococcus aureus</i>). Molecular docking was performed to identify the binding sites of the compounds. The biological activity and drug-likeness of the ligand and complex were investigated.</p>","PeriodicalId":767,"journal":{"name":"Russian Journal of Physical Chemistry A","volume":null,"pages":null},"PeriodicalIF":0.7000,"publicationDate":"2024-05-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Russian Journal of Physical Chemistry A","FirstCategoryId":"92","ListUrlMain":"https://link.springer.com/article/10.1134/S003602442405025X","RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
引用次数: 0

Abstract

In this study, 1,2-phenylenediamine-bis(isonitrosomethoxy-p-tolil keton) ligand and its Cu metal complex were synthesized and its structure was determined by spectroscopic methods. UV-visible spectra, mass and NMR spectra were investigated in chloroform. The FTIR spectra of these compounds were characterized in solid state. The geometry of the optimized ligand was calculated at 6-31G(d,p) levels by DFT/B3LYP method. The HOMO and LUMO void energies, MEP analysis, vibration analysis, geometric structure, 13C-NMR and 1H-NMR chemical shift calculations and other parameters of this calculated compound were obtained with the DFT/B3LYP/6-31G(d,p) basis set. The antibacterial activity of the ligand and complex was tested against gram positive and gram negative bacteria (Escherichia coli and Staphylococcus aureus). Molecular docking was performed to identify the binding sites of the compounds. The biological activity and drug-likeness of the ligand and complex were investigated.

Abstract Image

Abstract Image

新型肟配体及其 Cu(II) 复合物的合成与表征:DFT 计算、体外抗菌活性、药物相似性和分子对接研究
摘要 本研究合成了 1,2-苯二胺-双(异亚硝基甲氧基-对甲苯酮)配体及其铜金属配合物,并通过光谱方法确定了其结构。研究了氯仿中的紫外-可见光谱、质量和核磁共振光谱。这些化合物的傅立叶变换红外光谱在固态下进行了表征。通过 DFT/B3LYP 方法,在 6-31G(d,p) 水平上计算了优化配体的几何结构。利用 DFT/B3LYP/6-31G(d,p)基集获得了所计算化合物的 HOMO 和 LUMO 空能、MEP 分析、振动分析、几何结构、13C-NMR 和 1H-NMR 化学位移计算以及其他参数。测试了配体和复合物对革兰氏阳性和革兰氏阴性细菌(大肠杆菌和金黄色葡萄球菌)的抗菌活性。进行了分子对接以确定化合物的结合位点。研究了配体和复合物的生物活性和药物相似性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
CiteScore
1.20
自引率
14.30%
发文量
376
审稿时长
5.1 months
期刊介绍: Russian Journal of Physical Chemistry A. Focus on Chemistry (Zhurnal Fizicheskoi Khimii), founded in 1930, offers a comprehensive review of theoretical and experimental research from the Russian Academy of Sciences, leading research and academic centers from Russia and from all over the world. Articles are devoted to chemical thermodynamics and thermochemistry, biophysical chemistry, photochemistry and magnetochemistry, materials structure, quantum chemistry, physical chemistry of nanomaterials and solutions, surface phenomena and adsorption, and methods and techniques of physicochemical studies.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信