Gradient sensing limit of a cell when controlling the elongating direction

Kento Nakamura, Tetsuya J. Kobayashi
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Abstract

Eukaryotic cells perform chemotaxis by determining the direction of chemical gradients based on stochastic sensing of concentrations at the cell surface. To examine the efficiency of this process, previous studies have investigated the limit of estimation accuracy for gradients. However, these studies assume that the cell shape and gradient are constant, and do not consider how adaptive regulation of cell shape affects the estimation limit. Dynamics of cell shape during gradient sensing is biologically ubiquitous and can influence the estimation by altering the way the concentration is measured, and cells may strategically regulate their shape to improve estimation accuracy. To address this gap, we investigate the estimation limits in dynamic situations where cells change shape adaptively depending on the sensed signal. We approach this problem by analyzing the stationary solution of the Bayesian nonlinear filtering equation. By applying diffusion approximation to the ligand-receptor binding process and the Laplace method for the posterior expectation under a high signal-to-noise ratio regime, we obtain an analytical expression for the estimation limit. This expression indicates that estimation accuracy can be improved by elongating perpendicular to the estimated direction, which is also confirmed by numerical simulations. Our analysis provides a basis for clarifying the interplay between estimation and control in gradient sensing and sheds light on how cells optimize their shape to enhance chemotactic efficiency.
控制拉伸方向时电池的梯度感应极限
真核细胞通过随机感应细胞表面的浓度来确定化学梯度的方向,从而实现趋化作用。为了检验这一过程的效率,以往的研究对梯度估计精度的极限进行了研究。然而,这些研究假设细胞形状和梯度是恒定的,并没有考虑细胞形状的自适应调节如何影响估计极限。梯度传感过程中细胞形状的动态变化在生物界无处不在,它可以通过改变浓度测量的方式来影响估计结果,细胞可能会策略性地调节自己的形状以提高估计精度。为了弥补这一不足,我们研究了细胞根据感应信号自适应地改变形状的动态情况下的估计极限。我们通过分析贝叶斯非线性过滤方程的静态解来解决这一问题。通过对配体-受体结合过程应用扩散近似和高信噪比条件下的后验期望拉普拉斯法,我们得到了估计极限的解析表达式。该表达式表明,垂直于估计方向的拉长可以提高估计精度,数值模拟也证实了这一点。我们的分析为阐明梯度传感中估计与控制之间的相互作用提供了基础,并揭示了细胞如何优化其形状以提高化学作用效率。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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