Development of a multimodal geomarker pipeline to assess the impact of social, economic, and environmental factors on pediatric health outcomes.

IF 4.7 2区 医学 Q1 COMPUTER SCIENCE, INFORMATION SYSTEMS
Erika Rasnick Manning, Qing Duan, Stuart Taylor, Sarah Ray, Alexandra M S Corley, Joseph Michael, Ryan Gillette, Ndidi Unaka, David Hartley, Andrew F Beck, Cole Brokamp
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引用次数: 0

Abstract

Objectives: We sought to create a computational pipeline for attaching geomarkers, contextual or geographic measures that influence or predict health, to electronic health records at scale, including developing a tool for matching addresses to parcels to assess the impact of housing characteristics on pediatric health.

Materials and methods: We created a geomarker pipeline to link residential addresses from hospital admissions at Cincinnati Children's Hospital Medical Center (CCHMC) between July 2016 and June 2022 to place-based data. Linkage methods included by date of admission, geocoding to census tract, street range geocoding, and probabilistic address matching. We assessed 4 methods for probabilistic address matching.

Results: We characterized 124 244 hospitalizations experienced by 69 842 children admitted to CCHMC. Of the 55 684 hospitalizations with residential addresses in Hamilton County, Ohio, all were matched to 7 temporal geomarkers, 97% were matched to 79 census tract-level geomarkers and 13 point-level geomarkers, and 75% were matched to 16 parcel-level geomarkers. Parcel-level geomarkers were linked using our exact address matching tool developed using the best-performing linkage method.

Discussion: Our multimodal geomarker pipeline provides a reproducible framework for attaching place-based data to health data while maintaining data privacy. This framework can be applied to other populations and in other regions. We also created a tool for address matching that democratizes parcel-level data to advance precision population health efforts.

Conclusion: We created an open framework for multimodal geomarker assessment by harmonizing and linking a set of over 100 geomarkers to hospitalization data, enabling assessment of links between geomarkers and hospital admissions.

开发多模式地理标志物管道,以评估社会、经济和环境因素对儿科健康结果的影响。
目标:我们试图创建一个计算管道,将地理标志物(影响或预测健康的环境或地理措施)大规模地附加到电子健康记录中,包括开发一个将地址与地块相匹配的工具,以评估住房特征对儿科健康的影响:我们创建了一个地理标志物管道,将 2016 年 7 月至 2022 年 6 月期间辛辛那提儿童医院医疗中心(CCHMC)住院患者的居住地址与基于地点的数据联系起来。链接方法包括入院日期、人口普查区地理编码、街道范围地理编码和概率地址匹配。我们评估了 4 种概率地址匹配方法:我们对儿童医疗中心收治的 69 842 名儿童的 124 244 次住院经历进行了分析。在住址位于俄亥俄州汉密尔顿县的 55 684 例住院病例中,所有病例都与 7 个时间地理标记相匹配,97% 的病例与 79 个人口普查区级地理标记和 13 个点级地理标记相匹配,75% 的病例与 16 个地块级地理标记相匹配。地块级地理标记是利用我们使用表现最好的链接方法开发的精确地址匹配工具进行链接的:我们的多模态地理标志物管道提供了一个可重复的框架,用于将基于地点的数据附加到健康数据上,同时维护数据隐私。这一框架可应用于其他人群和其他地区。我们还创建了一个地址匹配工具,使地块级数据民主化,从而推进精准人口健康工作:我们创建了一个开放的多模态地理标志物评估框架,将一组 100 多个地理标志物与住院数据进行协调和链接,从而能够评估地理标志物与住院之间的联系。
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来源期刊
Journal of the American Medical Informatics Association
Journal of the American Medical Informatics Association 医学-计算机:跨学科应用
CiteScore
14.50
自引率
7.80%
发文量
230
审稿时长
3-8 weeks
期刊介绍: JAMIA is AMIA''s premier peer-reviewed journal for biomedical and health informatics. Covering the full spectrum of activities in the field, JAMIA includes informatics articles in the areas of clinical care, clinical research, translational science, implementation science, imaging, education, consumer health, public health, and policy. JAMIA''s articles describe innovative informatics research and systems that help to advance biomedical science and to promote health. Case reports, perspectives and reviews also help readers stay connected with the most important informatics developments in implementation, policy and education.
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