Structure of Subpopulations of Ayrshire, Holstein, and Jersey Cattle in the Southern Regions of Russia by CSN2 (rs43703011), CSN3 (rs43703016), and Microsatellite Loci (BM1818, BM1824, BM2113, ETH10, ETH225, ETH3, INRA023, SPS115, TGLA126, TGLA122, TGLA227, TGLA53)

IF 0.6 4区 生物学 Q4 GENETICS & HEREDITY
N. V. Kovalyuk, A. E. Volchenko, E. V. Shiryaeva, L. I. Yakusheva, Yu. Yu. Shakhnazarova
{"title":"Structure of Subpopulations of Ayrshire, Holstein, and Jersey Cattle in the Southern Regions of Russia by CSN2 (rs43703011), CSN3 (rs43703016), and Microsatellite Loci (BM1818, BM1824, BM2113, ETH10, ETH225, ETH3, INRA023, SPS115, TGLA126, TGLA122, TGLA227, TGLA53)","authors":"N. V. Kovalyuk, A. E. Volchenko, E. V. Shiryaeva, L. I. Yakusheva, Yu. Yu. Shakhnazarova","doi":"10.1134/s1022795424030074","DOIUrl":null,"url":null,"abstract":"<h3 data-test=\"abstract-sub-heading\">Abstract</h3><p>During studies using molecular biological methods, 3000 cow blood samples of the Ayrshire, Holstein, and Jersey breeds from the herds of Krasnodar and Stavropol krais were genotyped by the loci <i>BM1818</i>, <i>BM1824</i>, <i>BM2113</i>, <i>ETH10</i>, <i>ETH225</i>, <i>ETH3</i>, <i>INRA023</i>, <i>SPS115</i>, <i>TGLA126</i>, <i>TGLA122</i>, <i>TGLA227</i>, <i>TGLA53</i>, <i>CSN2</i> (rs43703011), and <i>CSN3</i> (rs43703016). On average, the frequency of occurrence of homozygous genotypes for 12 microsatellite loci in Jersey cattle was 0.38; in Holstein and Ayrshire cattle, it was 0.30 and 0.27, respectively; the highest allelic diversity was found in Holstein cattle (9.0 ± 1.7 alleles per locus). It should be noted that there are significant differences in the genetic profile of Ayrshire cattle. For Ayrshire animals, the following allelic variants turned out to be typical (but rare in Jersey and Holstein cattle): 270 of the locus <i>BM1818</i>, 137 of the locus <i>BM2113</i>, 213 of the locus <i>ETH10</i>, 119 of the locus <i>ETH3</i>, 142 of the locus <i>ETH225</i>, 87 of the locus <i>TGLA227</i>, 166 of the locus <i>TGLA53</i>. In the studied subpopulation of Jersey cattle, the frequency of occurrence of the <i>A2A2</i> genotype of the <i>CSN2</i> locus (rs43703011) (beta casein) was 0.68, and in the Ayrshire and Holstein groups, it was only 0.25 and 0.31, respectively. The <i>BB</i> genotype of the <i>CSN3</i> locus (rs43703016) (casein kappa) was found in the Jersey group of animals with a frequency of 0.76, and in Ayrshires and Holsteins, it was 0.04 and 0.15, respectively. The genotyped groups of Jersey, Ayrshire, and Holstein animals are significant in volume; we assume that the identified patterns are typical of cattle of these breeds in the south of Russia. We believe that the data obtained can be used in the future in practical work on classifying certain groups of livestock as typical Holstein, Ayrshire, or Jersey and when creating herds that produce milk of a certain type (for example, type A2 milk).</p>","PeriodicalId":21441,"journal":{"name":"Russian Journal of Genetics","volume":"13 1","pages":""},"PeriodicalIF":0.6000,"publicationDate":"2024-04-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Russian Journal of Genetics","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1134/s1022795424030074","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
引用次数: 0

Abstract

During studies using molecular biological methods, 3000 cow blood samples of the Ayrshire, Holstein, and Jersey breeds from the herds of Krasnodar and Stavropol krais were genotyped by the loci BM1818, BM1824, BM2113, ETH10, ETH225, ETH3, INRA023, SPS115, TGLA126, TGLA122, TGLA227, TGLA53, CSN2 (rs43703011), and CSN3 (rs43703016). On average, the frequency of occurrence of homozygous genotypes for 12 microsatellite loci in Jersey cattle was 0.38; in Holstein and Ayrshire cattle, it was 0.30 and 0.27, respectively; the highest allelic diversity was found in Holstein cattle (9.0 ± 1.7 alleles per locus). It should be noted that there are significant differences in the genetic profile of Ayrshire cattle. For Ayrshire animals, the following allelic variants turned out to be typical (but rare in Jersey and Holstein cattle): 270 of the locus BM1818, 137 of the locus BM2113, 213 of the locus ETH10, 119 of the locus ETH3, 142 of the locus ETH225, 87 of the locus TGLA227, 166 of the locus TGLA53. In the studied subpopulation of Jersey cattle, the frequency of occurrence of the A2A2 genotype of the CSN2 locus (rs43703011) (beta casein) was 0.68, and in the Ayrshire and Holstein groups, it was only 0.25 and 0.31, respectively. The BB genotype of the CSN3 locus (rs43703016) (casein kappa) was found in the Jersey group of animals with a frequency of 0.76, and in Ayrshires and Holsteins, it was 0.04 and 0.15, respectively. The genotyped groups of Jersey, Ayrshire, and Holstein animals are significant in volume; we assume that the identified patterns are typical of cattle of these breeds in the south of Russia. We believe that the data obtained can be used in the future in practical work on classifying certain groups of livestock as typical Holstein, Ayrshire, or Jersey and when creating herds that produce milk of a certain type (for example, type A2 milk).

Abstract Image

通过 CSN2 (rs43703011)、CSN3 (rs43703016) 和微卫星位点(BM1818、BM1824、BM2113、ETH10、ETH225、ETH3、INRA023、SPS115、TGLA126、TGLA122、TGLA227、TGLA53)分析俄罗斯南部地区艾尔夏牛、荷斯坦牛和泽西牛的亚群结构
摘要 在使用分子生物学方法进行的研究中,对来自克拉斯诺达尔边疆区和斯塔夫罗波尔边疆区牛群的3000份爱尔夏牛、荷斯坦牛和泽西牛血样进行了基因分型,基因分型位点为BM1818、BM1824、BM2113、ETH10、ETH225、ETH3、INRA023、SPS115、TGLA126、TGLA122、TGLA227、TGLA53、CSN2(rs43703011)和CSN3(rs43703016)。泽西牛 12 个微卫星位点的同源基因型出现频率平均为 0.38;荷斯坦牛和艾尔夏牛分别为 0.30 和 0.27;荷斯坦牛的等位基因多样性最高(每个位点 9.0 ± 1.7 个等位基因)。值得注意的是,艾尔夏牛的遗传特征存在显著差异。就艾尔夏牛而言,以下等位基因变异是典型的(但在泽西牛和荷斯坦牛中很少见):BM1818 基因座 270 个、BM2113 基因座 137 个、ETH10 基因座 213 个、ETH3 基因座 119 个、ETH225 基因座 142 个、TGLA227 基因座 87 个、TGLA53 基因座 166 个。在所研究的泽西牛亚群中,CSN2基因座(rs43703011)(β酪蛋白)的A2A2基因型出现频率为0.68,而在艾尔郡牛和荷斯坦牛群体中,出现频率分别只有0.25和0.31。CSN3基因座(rs43703016)(酪蛋白kappa)的BB基因型在泽西牛组中出现的频率为0.76,在艾希尔牛和荷斯坦牛组中分别为0.04和0.15。泽西牛、爱尔夏牛和荷斯坦牛的基因分型组在数量上很重要;我们认为,已确定的模式是俄罗斯南部这些品种牛的典型模式。我们相信,所获得的数据将来可用于实际工作中,将某些牲畜群体划分为典型的荷斯坦牛、爱尔夏牛或娟珊牛,以及建立生产某种类型牛奶(例如 A2 型牛奶)的牛群。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Russian Journal of Genetics
Russian Journal of Genetics 生物-遗传学
CiteScore
1.00
自引率
33.30%
发文量
126
审稿时长
1 months
期刊介绍: Russian Journal of Genetics is a journal intended to make significant contribution to the development of genetics. The journal publishes reviews and experimental papers in the areas of theoretical and applied genetics. It presents fundamental research on genetic processes at molecular, cell, organism, and population levels, including problems of the conservation and rational management of genetic resources and the functional genomics, evolutionary genomics and medical genetics.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信