PROTEIN INTERACTION STUDIES OF CROSS-LINKED ENDOLEVANASE AGGREGATES FROM BACILLUS LEHENSIS G1

Hotaf Hassan Makki, N. R. Jaafar, Roshanida A. Rahman, Z. Rahmat, Ni Nyoman Tri Puspaningsih, Rosli Md Illias
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Abstract

The efficiency of cross-linked enzyme aggregates (CLEAs) is mainly affected by the strength and binding site of the formed linkages between the enzyme and cross-linker. Therefore, this study investigated the impact of different macromolecular cross-linkers on various functional groups, their binding energy, and intermolecular interaction in generating CLEAs of endolevanase from Bacillus lehensis G1 (rlevblg1), through the combination of computational and experimental analysis. Due to the distanced bonding of dextran from the active site, rlevblg1 cross-linked with dextran (rlevblg1-dex-CLEAs) exhibited the highest binding affinity (− 7.1 kcal/mol) and activity recovery compared to six other cross-linkers. Thus, the role of computational cross-linker screening is confirmed as a crucial step to predict strong attachment and construct efficient CLEAs.
交联内切酶 G1 聚合体的蛋白质相互作用研究
交联酶聚集体(CLEAs)的效率主要受酶与交联剂之间形成的连接强度和结合位点的影响。因此,本研究通过计算和实验相结合的方法,研究了不同大分子交联剂在生成莱茵芽孢杆菌 G1(rlevblg1)内切酶 CLEAs 过程中对各种官能团、官能团结合能和分子间相互作用的影响。由于右旋糖酐与活性位点的键合距离较远,与其他六种交联剂相比,与右旋糖酐交联的 rlevblg1(rlevblg1-dex-CLEAs)表现出最高的结合亲和力(- 7.1 kcal/mol)和活性恢复能力。因此,计算交联剂筛选的作用被证实是预测强附着和构建高效 CLEAs 的关键步骤。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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