Creation of a nuclear magnetic resonance data repository and literature database.

Protein sequences & data analysis Pub Date : 1989-01-01
E L Ulrich, J L Markley, Y Kyogoku
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Abstract

We believe the need exists for an organized and accessible repository of protein nuclear magnetic resonance data. The structure and dynamics of hundreds of proteins are being investigated by NMR. NMR data currently are spread throughout the world and often are not published for lack of journal space. Difficulties in locating, obtaining, and correlating these data with protein structures limits their usefulness to the scientific community. In time, the data may become lost or ignored. To provide a collection point for the results of protein NMR studies and a uniform means of distributing these data, we propose that a data bank be created consisting of two databases: a comprehensive and thoroughly indexed database for the NMR literature and a data repository for the storage of extensive protein NMR data sets. Our current specifications for the types of information to be stored in the NMR databases and their organization for dissemination are defined. The design is intended to be flexible, capable of expanding to include new techniques, new forms of data, and biopolymers other than proteins. This is a proposal to the community of NMR spectroscopists. Only through the active cooperation and support of those in the field of NMR spectroscopy can the proposed data bank succeed.

建立核磁共振资料库及文献资料库。
我们认为需要一个有组织和可访问的蛋白质核磁共振数据存储库。数百种蛋白质的结构和动力学正在用核磁共振进行研究。目前,核磁共振数据遍布世界各地,由于期刊空间不足,往往无法发表。定位、获取和将这些数据与蛋白质结构联系起来的困难限制了它们对科学界的有用性。随着时间的推移,数据可能会丢失或被忽略。为了提供蛋白质核磁共振研究结果的收集点和分布这些数据的统一手段,我们建议创建一个由两个数据库组成的数据库:一个全面和彻底索引的核磁共振文献数据库和一个数据存储库,用于存储广泛的蛋白质核磁共振数据集。我们目前定义了存储在NMR数据库中的信息类型及其传播组织的规范。这种设计是灵活的,能够扩展到包括新技术、新形式的数据和除蛋白质以外的生物聚合物。这是一份给核磁共振波谱学家的建议。只有通过核磁共振波谱领域的积极合作和支持,所提出的数据库才能成功。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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