Octanol/water partition coefficients estimated using retention times in reverse-phase liquid chromatography and calculated in silico as one of the determinant factors for pharmacokinetic parameter estimations of general chemical substances.

IF 1.8 4区 医学 Q4 TOXICOLOGY
Koichiro Adachi, Makiko Shimizu, Fumiaki Shono, Kimito Funatsu, Hiroshi Yamazaki
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Abstract

The octanol/water partition coefficient P (logP) is a hydrophobicity index and is one of the determining factors for the pharmacokinetics of orally administered substances because it influences membrane permeability. To illustrate the wide-ranging variety of compounds in the chemical space, a two-dimensional data plot consisting of 25 blocks was previously proposed based on a substance's in silico chemical descriptors. The logP values of approximately 200 diverse chemicals (test plus reference compounds covering all 25 blocks of the chemical space) were estimated experimentally using retention times in reverse-phase liquid chromatography; these values were compared with those of authentic reference compounds with established logP values (available for 17 of 60 reference substances in the Organization for Economic Co-operation and Development Test Guideline 117). The logP values of 140 of 165 chemicals successfully estimated using four different mobile phase conditions (pH 2, 4, 7, and 10 for molecular forms) correlated significantly with those calculated using the in silico packages ChemDraw and ACD/Percepta (r > 0.72). Although substances that neighbored authentic compounds in the chemical space had precisely correlated logP values estimated experimentally and in silico, some compounds that were more distant from authentic substances showed lower logP values than those estimated in silico. These results indicate that additional authentic reference materials with wider ranging chemical diversity and their logP values from reverse-phase liquid chromatography should be included in the international test guidance to promote simple and reliable estimation of octanol/water partition coefficients, which are important determinant factors for the pharmacokinetics of general chemicals.

利用反相液相色谱法中的保留时间估算出的辛醇/水分配系数,并将其作为一般化学物质药代动力学参数估计的决定因素之一进行硅计算。
辛醇/水分配系数 P(logP)是一种疏水指数,是口服药物药代动力学的决定因素之一,因为它影响膜的渗透性。为了说明化学空间中的化合物种类繁多,以前曾根据物质的硅学化学描述符提出了一个由 25 个区块组成的二维数据图。利用反相液相色谱法中的保留时间,通过实验估算出了约 200 种不同化学物质(涵盖化学空间所有 25 个区块的测试化合物和参照化合物)的 logP 值;并将这些值与具有既定 logP 值的真实参照化合物的 logP 值进行了比较(经济合作与发展组织测试指南 117 提供了 60 种参照物质中 17 种物质的 logP 值)。使用四种不同的流动相条件(分子形式的 pH 值为 2、4、7 和 10)成功估算出了 165 种化学物质中 140 种物质的对数值,与使用 ChemDraw 和 ACD/Percepta 软件包计算出的对数值有显著的相关性(r > 0.72)。虽然在化学空间中与真品化合物相邻的物质的实验估计 logP 值与硅学估计 logP 值精确相关,但一些与真品化合物距离较远的化合物显示的 logP 值低于硅学估计值。这些结果表明,应在国际测试指南中纳入更多具有更广泛化学多样性的真品参考材料及其反相液相色谱法的对数值,以促进简单可靠地估算辛醇/水分配系数,因为辛醇/水分配系数是一般化学品药代动力学的重要决定因素。
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来源期刊
CiteScore
3.20
自引率
5.00%
发文量
53
审稿时长
4-8 weeks
期刊介绍: The Journal of Toxicological Sciences (J. Toxicol. Sci.) is a scientific journal that publishes research about the mechanisms and significance of the toxicity of substances, such as drugs, food additives, food contaminants and environmental pollutants. Papers on the toxicities and effects of extracts and mixtures containing unidentified compounds cannot be accepted as a general rule.
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