Using Bayesian hierarchical modeling for performance evaluation of clinical trial accrual for a cancer center

IF 1.4 Q4 MEDICINE, RESEARCH & EXPERIMENTAL
Xiaosong Shi , Dinesh Pal Mudaranthakam , Jo A. Wick , David Streeter , Jeffrey A. Thompson , Natalie R. Streeter , Tara L. Lin , Joseph Hines II , Matthew S. Mayo , Byron J. Gajewski
{"title":"Using Bayesian hierarchical modeling for performance evaluation of clinical trial accrual for a cancer center","authors":"Xiaosong Shi ,&nbsp;Dinesh Pal Mudaranthakam ,&nbsp;Jo A. Wick ,&nbsp;David Streeter ,&nbsp;Jeffrey A. Thompson ,&nbsp;Natalie R. Streeter ,&nbsp;Tara L. Lin ,&nbsp;Joseph Hines II ,&nbsp;Matthew S. Mayo ,&nbsp;Byron J. Gajewski","doi":"10.1016/j.conctc.2024.101281","DOIUrl":null,"url":null,"abstract":"<div><h3>Introduction</h3><p>Slow patient accrual in cancer clinical trials is always a concern. In 2021, the University of Kansas Comprehensive Cancer Center (KUCC), an NCI-designated comprehensive cancer center, implemented the Curated Cancer Clinical Outcomes Database (C3OD) to perform trial feasibility analyses using real-time electronic medical record data. In this study, we proposed a Bayesian hierarchical model to evaluate annual cancer clinical trial accrual performance.</p></div><div><h3>Methods</h3><p>The Bayesian hierarchical model uses Poisson models to describe the accrual performance of individual cancer clinical trials and a hierarchical component to describe the variation in performance across studies. Additionally, this model evaluates the impacts of the C3OD and the COVID-19 pandemic using posterior probabilities across evaluation years. The performance metric is the ratio of the observed accrual rate to the target accrual rate.</p></div><div><h3>Results</h3><p>Posterior medians of the annual accrual performance at the KUCC from 2018 to 2023 are 0.233, 0.246, 0.197, 0.150, 0.254, and 0.340. The COVID-19 pandemic partly explains the drop in performance in 2020 and 2021. The posterior probability that annual accrual performance is better with C3OD in 2023 than pre-pandemic (2019) is 0.935.</p></div><div><h3>Conclusions</h3><p>This study comprehensively evaluates the annual performance of clinical trial accrual at the KUCC, revealing a negative impact of COVID-19 and an ongoing positive impact of C3OD implementation. Two sensitivity analyses further validate the robustness of our model. Evaluating annual accrual performance across clinical trials is essential for a cancer center. The performance evaluation tools described in this paper are highly recommended for monitoring clinical trial accrual.</p></div>","PeriodicalId":37937,"journal":{"name":"Contemporary Clinical Trials Communications","volume":null,"pages":null},"PeriodicalIF":1.4000,"publicationDate":"2024-02-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2451865424000280/pdfft?md5=ff6bd5871d7cd8a61545f17f41326812&pid=1-s2.0-S2451865424000280-main.pdf","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Contemporary Clinical Trials Communications","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2451865424000280","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MEDICINE, RESEARCH & EXPERIMENTAL","Score":null,"Total":0}
引用次数: 0

Abstract

Introduction

Slow patient accrual in cancer clinical trials is always a concern. In 2021, the University of Kansas Comprehensive Cancer Center (KUCC), an NCI-designated comprehensive cancer center, implemented the Curated Cancer Clinical Outcomes Database (C3OD) to perform trial feasibility analyses using real-time electronic medical record data. In this study, we proposed a Bayesian hierarchical model to evaluate annual cancer clinical trial accrual performance.

Methods

The Bayesian hierarchical model uses Poisson models to describe the accrual performance of individual cancer clinical trials and a hierarchical component to describe the variation in performance across studies. Additionally, this model evaluates the impacts of the C3OD and the COVID-19 pandemic using posterior probabilities across evaluation years. The performance metric is the ratio of the observed accrual rate to the target accrual rate.

Results

Posterior medians of the annual accrual performance at the KUCC from 2018 to 2023 are 0.233, 0.246, 0.197, 0.150, 0.254, and 0.340. The COVID-19 pandemic partly explains the drop in performance in 2020 and 2021. The posterior probability that annual accrual performance is better with C3OD in 2023 than pre-pandemic (2019) is 0.935.

Conclusions

This study comprehensively evaluates the annual performance of clinical trial accrual at the KUCC, revealing a negative impact of COVID-19 and an ongoing positive impact of C3OD implementation. Two sensitivity analyses further validate the robustness of our model. Evaluating annual accrual performance across clinical trials is essential for a cancer center. The performance evaluation tools described in this paper are highly recommended for monitoring clinical trial accrual.

使用贝叶斯层次模型对癌症中心的临床试验应计进行绩效评估
导言:癌症临床试验中患者累积缓慢一直是一个令人担忧的问题。2021年,堪萨斯大学综合癌症中心(KUCC)作为NCI指定的综合癌症中心,建立了癌症临床结果数据库(C3OD),利用实时电子病历数据进行试验可行性分析。在这项研究中,我们提出了一个贝叶斯分层模型来评估年度癌症临床试验的应计绩效。方法贝叶斯分层模型使用泊松模型来描述单个癌症临床试验的应计绩效,并使用分层组件来描述不同研究之间的绩效差异。此外,该模型还使用跨评估年的后验概率评估了 C3OD 和 COVID-19 大流行的影响。性能指标是观察到的应计率与目标应计率的比率。结果从 2018 年到 2023 年,KUCC 年度应计性能的后验中值分别为 0.233、0.246、0.197、0.150、0.254 和 0.340。COVID-19 大流行病是 2020 年和 2021 年绩效下降的部分原因。该研究全面评估了 KUCC 临床试验应计的年度绩效,揭示了 COVID-19 的负面影响和 C3OD 实施的持续积极影响。两项敏感性分析进一步验证了我们模型的稳健性。评估临床试验的年度应计绩效对癌症中心至关重要。本文介绍的绩效评估工具是监测临床试验应计项目的强烈推荐工具。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Contemporary Clinical Trials Communications
Contemporary Clinical Trials Communications Pharmacology, Toxicology and Pharmaceutics-Pharmacology
CiteScore
2.70
自引率
6.70%
发文量
146
审稿时长
20 weeks
期刊介绍: Contemporary Clinical Trials Communications is an international peer reviewed open access journal that publishes articles pertaining to all aspects of clinical trials, including, but not limited to, design, conduct, analysis, regulation and ethics. Manuscripts submitted should appeal to a readership drawn from a wide range of disciplines including medicine, life science, pharmaceutical science, biostatistics, epidemiology, computer science, management science, behavioral science, and bioethics. Contemporary Clinical Trials Communications is unique in that it is outside the confines of disease specifications, and it strives to increase the transparency of medical research and reduce publication bias by publishing scientifically valid original research findings irrespective of their perceived importance, significance or impact. Both randomized and non-randomized trials are within the scope of the Journal. Some common topics include trial design rationale and methods, operational methodologies and challenges, and positive and negative trial results. In addition to original research, the Journal also welcomes other types of communications including, but are not limited to, methodology reviews, perspectives and discussions. Through timely dissemination of advances in clinical trials, the goal of Contemporary Clinical Trials Communications is to serve as a platform to enhance the communication and collaboration within the global clinical trials community that ultimately advances this field of research for the benefit of patients.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信