Population genetics reveals new introgression in the nucleus herd of min pigs.

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY
Accounts of Chemical Research Pub Date : 2024-04-01 Epub Date: 2024-02-21 DOI:10.1007/s13258-024-01490-1
Tianxin Liu, Dongqing Ji, Xinyuan Li, Jiadong Liu, Fei Xu, Zhiying Miao, Yang Chang, Ming Tian, Chunzhu Xu
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引用次数: 0

Abstract

Objective: Min pigs are a unique genetic resource among local pig breeds in China. They have more excellent characteristics in cold and stress resistance, good meat quality, and a high reproductive rate. However, the genetic structure and driving factors remain unclear in the nucleus herd. In this study, the genetic diversity of Min pigs was studied to reveal the formation mechanism of its unique genetic structure. We hope to protect and develop the genetic resources of Min pigs.

Methods: We analyzed different types of genes to identify the genetic structure and gene introgression pattern of Min pigs. The nuclear DNA dataset includes information on 21 microsatellite loci and 6 Y-chromosome genes, and the mitochondrial D-loop gene is selected to represent maternal lineages. The above genes are all from the nucleus herd of Min pigs.

Results: The results of genetic structure identification and analysis of potential exogenous gene introgression patterns indicate that the nucleus herd of Min pigs maintains a high level of genetic diversity (polymorphism information content = 0.713, expected heterozygosity = 0.662, observed heterozygosity = 0.612). Compared with other Asian pig breeds, the formation of Min pig breeds is more special. Gene introgression from European pig breeds to Min pigs has occurred, which is characterized by complete introgression of paternal genes and incomplete introgression of maternal genes.

Conclusion: Gene introgression caused by cross-breeding is not the main factor leading to the formation of the current genetic structure of Min pigs, but this process has increased the level of genetic diversity in the nucleus herd. Compared with the influence of gene introgression, our research suggest that artificial selection and environmental adaptive evolution make Min pigs form unique genetic characteristics.

种群遗传学揭示了闽猪核心群的新引种。
目的:闽猪是中国地方猪种中独特的遗传资源。闽猪具有抗寒、抗逆、肉质好、繁殖率高等优良特性。然而,核心群的遗传结构和驱动因素仍不清楚。本研究通过对闽猪遗传多样性的研究,揭示其独特遗传结构的形成机制。我们希望保护和开发闽猪的遗传资源:我们分析了不同类型的基因,以确定闽猪的遗传结构和基因导入模式。核DNA数据集包括21个微卫星位点和6个Y染色体基因的信息,线粒体D环基因被选中代表母系。以上基因均来自闽猪核群:遗传结构鉴定和潜在外源基因导入模式分析结果表明,闽猪核心群保持着较高的遗传多样性(多态性信息含量=0.713,预期杂合度=0.662,观察杂合度=0.612)。与其他亚洲猪种相比,闽猪品种的形成更为特殊。从欧洲猪种到闽猪的基因导入发生了,其特点是父系基因的完全导入和母系基因的不完全导入:结论:杂交导致的基因导入并不是形成当前闽猪遗传结构的主要因素,但这一过程提高了核心群的遗传多样性水平。与基因导入的影响相比,我们的研究表明,人工选择和环境适应性进化使闽猪形成了独特的遗传特征。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
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