Ensemble2: Scenarios ensembling for communication and performance analysis

IF 3 3区 医学 Q2 INFECTIOUS DISEASES
Clara Bay , Guillaume St-Onge , Jessica T. Davis , Matteo Chinazzi , Emily Howerton , Justin Lessler , Michael C. Runge , Katriona Shea , Shaun Truelove , Cecile Viboud , Alessandro Vespignani
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引用次数: 0

Abstract

Throughout the COVID-19 pandemic, scenario modeling played a crucial role in shaping the decision-making process of public health policies. Unlike forecasts, scenario projections rely on specific assumptions about the future that consider different plausible states-of-the-world that may or may not be realized and that depend on policy interventions, unpredictable changes in the epidemic outlook, etc. As a consequence, long-term scenario projections require different evaluation criteria than the ones used for traditional short-term epidemic forecasts. Here, we propose a novel ensemble procedure for assessing pandemic scenario projections using the results of the Scenario Modeling Hub (SMH) for COVID-19 in the United States (US). By defining a “scenario ensemble” for each model and the ensemble of models, termed “Ensemble2”, we provide a synthesis of potential epidemic outcomes, which we use to assess projections’ performance, bypassing the identification of the most plausible scenario. We find that overall the Ensemble2 models are well-calibrated and provide better performance than the scenario ensemble of individual models. The ensemble procedure accounts for the full range of plausible outcomes and highlights the importance of scenario design and effective communication. The scenario ensembling approach can be extended to any scenario design strategy, with potential refinements including weighting scenarios and allowing the ensembling process to evolve over time.

Ensemble2:用于通信和性能分析的情景组合
在 COVID-19 大流行期间,情景建模在公共卫生政策决策过程中发挥了至关重要的作用。与预测不同,情景预测依赖于对未来的具体假设,这些假设考虑了可能实现也可能不实现的不同可信的世界状态,并取决于政策干预、流行病前景的不可预测变化等。因此,长期情景预测需要与传统短期流行病预测不同的评估标准。在此,我们利用美国 COVID-19 的情景模拟中心(SMH)的结果,提出了一种评估大流行情景预测的新型集合程序。通过为每个模型和称为 "Ensemble2 "的模型集合定义一个 "情景集合",我们提供了一个潜在流行病结果的综合体,用来评估预测的性能,绕过了确定最合理情景的过程。我们发现,总体而言,"Ensemble2 "模型校准良好,其性能优于单个模型的情景集合。集合程序考虑了所有可能的结果,突出了情景设计和有效沟通的重要性。情景集合方法可扩展到任何情景设计策略,可能的改进包括对情景加权和允许集合过程随时间演变。
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来源期刊
Epidemics
Epidemics INFECTIOUS DISEASES-
CiteScore
6.00
自引率
7.90%
发文量
92
审稿时长
140 days
期刊介绍: Epidemics publishes papers on infectious disease dynamics in the broadest sense. Its scope covers both within-host dynamics of infectious agents and dynamics at the population level, particularly the interaction between the two. Areas of emphasis include: spread, transmission, persistence, implications and population dynamics of infectious diseases; population and public health as well as policy aspects of control and prevention; dynamics at the individual level; interaction with the environment, ecology and evolution of infectious diseases, as well as population genetics of infectious agents.
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