Arnab Hazra, Pratik Nag, Rishikesh Yadav, Ying Sun
{"title":"Exploring the Efficacy of Statistical and Deep Learning Methods for Large Spatial Datasets: A Case Study","authors":"Arnab Hazra, Pratik Nag, Rishikesh Yadav, Ying Sun","doi":"10.1007/s13253-024-00602-4","DOIUrl":null,"url":null,"abstract":"<p>Increasingly large and complex spatial datasets pose massive inferential challenges due to high computational and storage costs. Our study is motivated by the KAUST Competition on Large Spatial Datasets 2023, which tasked participants with estimating spatial covariance-related parameters and predicting values at testing sites, along with uncertainty estimates. We compared various statistical and deep learning approaches through cross-validation and ultimately selected the Vecchia approximation technique for model fitting. To overcome the constraints in the <span>R</span> package <span>GpGp</span>, which lacked support for fitting zero-mean Gaussian processes and direct uncertainty estimation—two things that are necessary for the competition, we developed additional <span>R</span> functions. Besides, we implemented certain subsampling-based approximations and parametric smoothing for skewed sampling distributions of the estimators. Our team DesiBoys secured the first position in two out of four sub-competitions and the second position in the other two, validating the effectiveness of our proposed strategies. Moreover, we extended our evaluation to a large real spatial satellite-derived dataset on total precipitable water, where we compared the predictive performances of different models using multiple diagnostics.</p>","PeriodicalId":1,"journal":{"name":"Accounts of Chemical Research","volume":null,"pages":null},"PeriodicalIF":16.4000,"publicationDate":"2024-02-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Accounts of Chemical Research","FirstCategoryId":"100","ListUrlMain":"https://doi.org/10.1007/s13253-024-00602-4","RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0
Abstract
Increasingly large and complex spatial datasets pose massive inferential challenges due to high computational and storage costs. Our study is motivated by the KAUST Competition on Large Spatial Datasets 2023, which tasked participants with estimating spatial covariance-related parameters and predicting values at testing sites, along with uncertainty estimates. We compared various statistical and deep learning approaches through cross-validation and ultimately selected the Vecchia approximation technique for model fitting. To overcome the constraints in the R package GpGp, which lacked support for fitting zero-mean Gaussian processes and direct uncertainty estimation—two things that are necessary for the competition, we developed additional R functions. Besides, we implemented certain subsampling-based approximations and parametric smoothing for skewed sampling distributions of the estimators. Our team DesiBoys secured the first position in two out of four sub-competitions and the second position in the other two, validating the effectiveness of our proposed strategies. Moreover, we extended our evaluation to a large real spatial satellite-derived dataset on total precipitable water, where we compared the predictive performances of different models using multiple diagnostics.
期刊介绍:
Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance.
Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.