Preeclampsia prediction with maternal and paternal polygenic risk scores: the TMM BirThree Cohort Study

Hisashi Ohseto, Mami Ishikuro, Taku Obara, Akira Narita, Ippei Takahashi, Genki Shinoda, Aoi Noda, Keiko Murakami, Masatsugu Orui, Noriyuki Iwama, Masahiro Kikuya, Hirohito Metoki, Junichi Sugawara, Gen Tamiya, Shinichi Kuriyama
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Abstract

Background: Genomic information from pregnant women and their husbands may provide effective biomarkers for preeclampsia. This study investigated how parental polygenic risk scores (PRSs) for blood pressure (BP) and preeclampsia are associated with preeclampsia onset and evaluated predictive performances of PRSs with clinical predictive variables. Methods: In the Tohoku Medical Megabank Project Birth and Three-Generation Cohort Study, participants were genotyped using either Affymetrix Axiom Japonica Array v2 (further divided into two cohorts?the PRS training cohort and the internal-validation cohort?at a ratio of 1:2) or Japonica Array NEO (external-validation cohort). PRSs were calculated for systolic BP (SBP), diastolic BP (DBP), and preeclampsia. Associations between PRSs and preeclampsia, including preeclampsia superimposed on chronic hypertension, were examined using logistic regression analysis; prediction models were developed using a competing-risks approach with clinical predictive variables and PRSs. Results: In total, 19,836 participants were included. Hyperparameters for PRS calculation were optimized for 3,384 participants in the training cohort. In internal- and external-validation cohorts, 357 of 6,768 (5.3%) and 269 of 9,684 (2.8%) participants developed preeclampsia, respectively. Preeclampsia onset was significantly associated with maternal PRSs for SBP and DBP in internal- and external-validation cohorts and with paternal PRSs for SBP and DBP only in the external-validation cohort. Maternal PRSs for DBP calculated using ?LDpred2? most improved prediction models. Maternal PRSs for DBP provided additional predictive information on clinical predictive variables. Paternal PRSs for DBP improved prediction models in the internal-validation cohort. Conclusions: Parental PRS, along with clinical predictive variables, is potentially useful for predicting preeclampsia.
利用母系和父系多基因风险评分预测子痫前期:TMM BirThree 队列研究
背景:来自孕妇及其丈夫的基因组信息可为子痫前期提供有效的生物标志物。本研究调查了父母血压(BP)和子痫前期的多基因风险评分(PRSs)与子痫前期发病的相关性,并评估了PRSs与临床预测变量的预测性能:在东北医学大型数据库项目出生和三代队列研究(Tohoku Medical Megabank Project Birth and Three-Generation Cohort Study)中,使用Affymetrix Axiom Japonica Array v2(进一步分为两个队列:PRS训练队列和内部验证队列,比例为1:2)或Japonica Array NEO(外部验证队列)对参与者进行基因分型。计算了收缩压 (SBP)、舒张压 (DBP) 和子痫前期的 PRSs。使用逻辑回归分析检验了PRS与子痫前期(包括与慢性高血压叠加的子痫前期)之间的关联;使用临床预测变量和PRS的竞争风险方法建立了预测模型:共纳入 19 836 名参与者。对训练队列中的 3,384 名参与者的 PRS 计算超参数进行了优化。在内部和外部验证队列中,6,768 名参与者中的 357 人(5.3%)和 9,684 名参与者中的 269 人(2.8%)分别出现了子痫前期。在内部和外部验证队列中,子痫前期的发生与母体的 SBP 和 DBP PRSs 显著相关,而在外部验证队列中,仅与父体的 SBP 和 DBP PRSs 显著相关。使用 LDpred2 计算的母体 DBP PRSs 是最完善的预测模型。母体的 DBP PRS 为临床预测变量提供了额外的预测信息。在内部验证队列中,父亲的 DBP PRS 改善了预测模型:结论:父母的 PRS 以及临床预测变量可能有助于预测子痫前期。
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