Studies on the binding of wedelolactone to human serum albumin with multi-spectroscopic analysis, molecular docking and molecular dynamic simulation

IF 3.3 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY
Yali Liu, Zhen Yuan, Pan Zhao, Changxin Li, Lu Qin, Tianlun Zhao, Xiaojing Zhu, Shuai Feng
{"title":"Studies on the binding of wedelolactone to human serum albumin with multi-spectroscopic analysis, molecular docking and molecular dynamic simulation","authors":"Yali Liu,&nbsp;Zhen Yuan,&nbsp;Pan Zhao,&nbsp;Changxin Li,&nbsp;Lu Qin,&nbsp;Tianlun Zhao,&nbsp;Xiaojing Zhu,&nbsp;Shuai Feng","doi":"10.1016/j.bpc.2024.107198","DOIUrl":null,"url":null,"abstract":"<div><p>Wedelolactone (WEL) is a small molecule compound isolated from <em>Eclipta prostrate</em> L., which has been reported to possess various biological activities such as anti-hepatotoxicity, anti-hypertension, anti-tumour, anti-phospholipase A2 and detoxification activity against snake venom. In the present study, we investigated the interaction of WEL with human serum albumin (HSA) using simultaneous fluorescence, UV–visible spectroscopy, 3D fluorescence spectroscopy, Fourier transform infrared spectroscopy (FTIR), molecular docking technique and molecular dynamics simulation. We found that the interaction between HSA and WEL can exhibit a static fluorescence burst mechanism, and the binding process is essentially spontaneous, with the main forces manifested as hydrogen bonding, van der Waals force and electrostatic interactions. Competitive binding and molecular docking studies showed that WEL preferentially bound to HSA in substructural region IIA (site I); molecular dynamics simulations showed that HSA interacted with WEL to form a stable complex, which also induced conformational changes in HSA. The study of the interaction between WEL and HSA can provide a reference for a more in-depth study of the pharmacodynamic mechanism of WEL and its further development and utilisation.</p></div>","PeriodicalId":8979,"journal":{"name":"Biophysical chemistry","volume":"307 ","pages":"Article 107198"},"PeriodicalIF":3.3000,"publicationDate":"2024-02-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biophysical chemistry","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0301462224000279","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Wedelolactone (WEL) is a small molecule compound isolated from Eclipta prostrate L., which has been reported to possess various biological activities such as anti-hepatotoxicity, anti-hypertension, anti-tumour, anti-phospholipase A2 and detoxification activity against snake venom. In the present study, we investigated the interaction of WEL with human serum albumin (HSA) using simultaneous fluorescence, UV–visible spectroscopy, 3D fluorescence spectroscopy, Fourier transform infrared spectroscopy (FTIR), molecular docking technique and molecular dynamics simulation. We found that the interaction between HSA and WEL can exhibit a static fluorescence burst mechanism, and the binding process is essentially spontaneous, with the main forces manifested as hydrogen bonding, van der Waals force and electrostatic interactions. Competitive binding and molecular docking studies showed that WEL preferentially bound to HSA in substructural region IIA (site I); molecular dynamics simulations showed that HSA interacted with WEL to form a stable complex, which also induced conformational changes in HSA. The study of the interaction between WEL and HSA can provide a reference for a more in-depth study of the pharmacodynamic mechanism of WEL and its further development and utilisation.

Abstract Image

利用多光谱分析、分子对接和分子动力学模拟研究蟛蜞菊内酯与人血清白蛋白的结合情况
蟛蜞菊内酯(WEL)是从蟛蜞菊(Eclipta prostrate L.)中分离出来的一种小分子化合物,据报道它具有多种生物活性,如抗肝毒性、抗高血压、抗肿瘤、抗磷脂酶 A2 和对蛇毒的解毒活性。在本研究中,我们采用同步荧光光谱、紫外可见光谱、三维荧光光谱、傅立叶变换红外光谱、分子对接技术和分子动力学模拟等方法研究了 WEL 与人血清白蛋白(HSA)的相互作用。我们发现,HSA 与 WEL 之间的相互作用可呈现静态荧光猝灭机制,结合过程基本上是自发的,主要作用力表现为氢键、范德华力和静电作用。竞争性结合和分子对接研究表明,WEL优先与亚结构区IIA(位点I)的HSA结合;分子动力学模拟表明,HSA与WEL相互作用形成稳定的复合物,同时诱导HSA发生构象变化。对 WEL 与 HSA 之间相互作用的研究可为更深入地研究 WEL 的药效学机制及其进一步开发和利用提供参考。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Biophysical chemistry
Biophysical chemistry 生物-生化与分子生物学
CiteScore
6.10
自引率
10.50%
发文量
121
审稿时长
20 days
期刊介绍: Biophysical Chemistry publishes original work and reviews in the areas of chemistry and physics directly impacting biological phenomena. Quantitative analysis of the properties of biological macromolecules, biologically active molecules, macromolecular assemblies and cell components in terms of kinetics, thermodynamics, spatio-temporal organization, NMR and X-ray structural biology, as well as single-molecule detection represent a major focus of the journal. Theoretical and computational treatments of biomacromolecular systems, macromolecular interactions, regulatory control and systems biology are also of interest to the journal.
文献相关原料
公司名称 产品信息 采购帮参考价格
上海源叶 WEL
¥2252.82~¥7517.02
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信