A database of the healthy human spinal cord morphometry in the PAM50 template space

J. Valošek, Sandrine Bédard, M. Keřkovský, Tomáš Rohan, Julien Cohen-Adad
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Abstract

Abstract Measures of spinal cord morphometry computed from magnetic resonance images serve as relevant prognostic biomarkers for a range of spinal cord pathologies, including traumatic and non-traumatic spinal cord injury and neurodegenerative diseases. However, interpreting these imaging biomarkers is difficult due to considerable intra- and inter-subject variability. Yet, there is no clear consensus on a normalization method that would help reduce this variability and more insights into the distribution of these morphometrics are needed. In this study, we computed a database of normative values for six commonly used measures of spinal cord morphometry: cross-sectional area, anteroposterior diameter, transverse diameter, compression ratio, eccentricity, and solidity. Normative values were computed from a large open-access dataset of healthy adult volunteers (N = 203) and were brought to the common space of the PAM50 spinal cord template using a newly proposed normalization method based on linear interpolation. Compared to traditional image-based registration, the proposed normalization approach does not involve image transformations and, therefore, does not introduce distortions of spinal cord anatomy. This is a crucial consideration in preserving the integrity of the spinal cord anatomy in conditions such as spinal cord injury. This new morphometric database allows researchers to normalize based on sex and age, thereby minimizing inter-subject variability associated with demographic and biological factors. The proposed methodology is open-source and accessible through the Spinal Cord Toolbox (SCT) v6.0 and higher.
PAM50 模板空间中的健康人脊髓形态数据库
摘要 通过磁共振图像计算出的脊髓形态测量值是一系列脊髓病变的相关预后生物标志物,包括创伤性和非创伤性脊髓损伤以及神经退行性疾病。然而,由于受试者内部和受试者之间存在相当大的差异,解释这些成像生物标志物十分困难。然而,人们对有助于减少这种变异性的归一化方法还没有达成明确的共识,需要对这些形态计量学的分布有更多的了解。在这项研究中,我们为脊髓形态测量的六种常用测量方法计算了标准值数据库:横截面积、前后径、横径、压缩比、偏心率和坚实度。标准值是从一个大型健康成年志愿者开放数据集(N = 203)中计算出来的,并通过新提出的基于线性插值的归一化方法将其归入 PAM50 脊髓模板的公共空间。与传统的基于图像的配准相比,所提出的归一化方法不涉及图像变换,因此不会造成脊髓解剖结构的失真。这是在脊髓损伤等情况下保持脊髓解剖完整性的重要考虑因素。这种新的形态计量数据库允许研究人员根据性别和年龄进行归一化处理,从而最大限度地减少与人口和生物因素相关的受试者之间的差异。建议的方法是开源的,可通过脊髓工具箱(SCT)v6.0 及更高版本访问。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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