Discovery of Generalizable TBI Phenotypes Using Multivariate Time-Series Clustering.

ArXiv Pub Date : 2024-08-20
Hamid Ghaderi, Brandon Foreman, Chandan K Reddy, Vignesh Subbian
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Abstract

Traumatic Brain Injury (TBI) presents a broad spectrum of clinical presentations and outcomes due to its inherent heterogeneity, leading to diverse recovery trajectories and varied therapeutic responses. While many studies have delved into TBI phenotyping for distinct patient populations, identifying TBI phenotypes that consistently generalize across various settings and populations remains a critical research gap. Our research addresses this by employing multivariate time-series clustering to unveil TBI's dynamic intricates. Utilizing a self-supervised learning-based approach to clustering multivariate time-Series data with missing values (SLAC-Time), we analyzed both the research-centric TRACK-TBI and the real-world MIMIC-IV datasets. Remarkably, the optimal hyperparameters of SLAC-Time and the ideal number of clusters remained consistent across these datasets, underscoring SLAC-Time's stability across heterogeneous datasets. Our analysis revealed three generalizable TBI phenotypes (α, β, and γ), each exhibiting distinct non-temporal features during emergency department visits, and temporal feature profiles throughout ICU stays. Specifically, phenotype α represents mild TBI with a remarkably consistent clinical presentation. In contrast, phenotype β signifies severe TBI with diverse clinical manifestations, and phenotype γ represents a moderate TBI profile in terms of severity and clinical diversity. Age is a significant determinant of TBI outcomes, with older cohorts recording higher mortality rates. Importantly, while certain features varied by age, the core characteristics of TBI manifestations tied to each phenotype remain consistent across diverse populations.

利用多变量时间序列聚类发现可通用的创伤性脑损伤表型。
创伤性脑损伤(TBI)因其固有的异质性而呈现出广泛的临床表现和结果,导致不同的康复轨迹和不同的治疗反应。虽然许多研究都针对不同的患者人群对 TBI 表型进行了深入研究,但确定在不同环境和人群中具有一致性的 TBI 表型仍然是一个关键的研究空白。我们的研究采用多变量时间序列聚类来揭示 TBI 的动态内在联系,从而解决了这一问题。我们利用基于自我监督学习的方法对有缺失值的多元时间序列数据(SLAC-Time)进行聚类,分析了以研究为中心的 TRACK-TBI 数据集和现实世界中的 MIMIC-IV 数据集。值得注意的是,在这些数据集中,SLAC-Time 的最佳超参数和理想聚类数保持一致,这突出表明了 SLAC-Time 在异构数据集中的稳定性。我们的分析揭示了三种可通用的创伤性脑损伤表型({\alpha}, \b{eta}和{\gamma}),每种表型在急诊科就诊时都表现出不同的非时间特征,而在重症监护室住院期间则表现出不同的时间特征。具体来说,表型{\alpha}代表轻度创伤性脑损伤,临床表现非常一致。相比之下,表型{b{eta}代表临床表现多样的重度创伤性脑损伤,而表型{γ}则在严重程度和临床多样性方面代表中度创伤性脑损伤。年龄是决定创伤性脑损伤结果的重要因素,年龄越大,死亡率越高。重要的是,虽然某些特征因年龄而异,但与每种表型相关的创伤性脑损伤表现的核心特征在不同人群中保持一致。
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