High-throughput assessment of cellular senescence.

4区 生物学 Q4 Biochemistry, Genetics and Molecular Biology
Methods in cell biology Pub Date : 2024-01-01 Epub Date: 2023-05-30 DOI:10.1016/bs.mcb.2023.02.017
Giulia Cerrato, Allan Sauvat, Félix Peyre, Oliver Kepp, Guido Kroemer
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引用次数: 0

Abstract

Cellular senescence is a molecular process that is activated in response to a large variety of distinct stress signals. Mechanistically, cellular senescence is characterized by an arrest in cell cycle accompanied by phenotypic adaptations and physiological alterations including changes in the secretory profile of senescent cells termed the senescence-associated secretory phenotype (SASP). Here we describe a detailed, automation- compatible method for the detection of senescence-associated beta galactosidase (SA-β-gal) activity as a hallmark of cellular senescence using a conventional fluorescent microscope equipped with a transmitted light module. Moreover, we outline a protocol for the automated analysis of cellular senescence using convolutional neural networks (CNNs) and mathematical morphology. In sum, we provide a toolset for the high throughput assessment of cellular senescence based on light microscopy and automated image analysis.

高通量评估细胞衰老。
细胞衰老是一个分子过程,是对多种不同压力信号的反应。从机理上讲,细胞衰老的特征是细胞周期的停滞,伴随着表型适应和生理改变,包括衰老细胞分泌谱的变化,称为衰老相关分泌表型(SASP)。在这里,我们描述了一种详细的、自动化兼容的方法,利用配备透射光模块的传统荧光显微镜检测衰老相关的 beta-半乳糖苷酶(SA-β-gal)活性,这是细胞衰老的标志。此外,我们还概述了利用卷积神经网络(CNN)和数学形态学自动分析细胞衰老的方案。总之,我们提供了一套基于光学显微镜和自动图像分析的高通量细胞衰老评估工具。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Methods in cell biology
Methods in cell biology 生物-细胞生物学
CiteScore
3.10
自引率
0.00%
发文量
125
审稿时长
3 months
期刊介绍: For over fifty years, Methods in Cell Biology has helped researchers answer the question "What method should I use to study this cell biology problem?" Edited by leaders in the field, each thematic volume provides proven, state-of-art techniques, along with relevant historical background and theory, to aid researchers in efficient design and effective implementation of experimental methodologies. Over its many years of publication, Methods in Cell Biology has built up a deep library of biological methods to study model developmental organisms, organelles and cell systems, as well as comprehensive coverage of microscopy and other analytical approaches.
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