{"title":"Existence of two distinct time scales in the Fairen-Velarde model of bacterial respiration","authors":"Soumyadeep Kundu, M. Acharyya","doi":"10.1142/s0129183124500943","DOIUrl":null,"url":null,"abstract":"We study the bacterial respiration through the numerical solution of the Fairen-Velarde coupled nonlinear differential equations. The instantaneous concentrations of the oxygen and the nutrients are computed. The fixed point solution and the stable limit cycle are found in different parameter ranges as predicted by the linearized differential equations. In a specified range of parameters, it is observed that the system spends some time near the stable limit cycle and eventually reaches the stable fixed point. This metastability has been investigated systematically. Interestingly, it is observed that the system exhibits two distinctly different time scales in reaching the stable fixed points. The slow time scale of the metastable lifetime near the stable limit cycle and a fast time scale (after leaving the zone of limit cycle) in rushing towards the stable fixed point. The gross residence time, near the limit cycle (described by a slow time scale), can be reduced by varying the concentrations of nutrients. This idea can be used to control the harmful metastable lifespan of active bacteria.","PeriodicalId":50308,"journal":{"name":"International Journal of Modern Physics C","volume":null,"pages":null},"PeriodicalIF":1.5000,"publicationDate":"2023-10-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"International Journal of Modern Physics C","FirstCategoryId":"101","ListUrlMain":"https://doi.org/10.1142/s0129183124500943","RegionNum":4,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS","Score":null,"Total":0}
引用次数: 0
Abstract
We study the bacterial respiration through the numerical solution of the Fairen-Velarde coupled nonlinear differential equations. The instantaneous concentrations of the oxygen and the nutrients are computed. The fixed point solution and the stable limit cycle are found in different parameter ranges as predicted by the linearized differential equations. In a specified range of parameters, it is observed that the system spends some time near the stable limit cycle and eventually reaches the stable fixed point. This metastability has been investigated systematically. Interestingly, it is observed that the system exhibits two distinctly different time scales in reaching the stable fixed points. The slow time scale of the metastable lifetime near the stable limit cycle and a fast time scale (after leaving the zone of limit cycle) in rushing towards the stable fixed point. The gross residence time, near the limit cycle (described by a slow time scale), can be reduced by varying the concentrations of nutrients. This idea can be used to control the harmful metastable lifespan of active bacteria.
期刊介绍:
International Journal of Modern Physics C (IJMPC) is a journal dedicated to Computational Physics and aims at publishing both review and research articles on the use of computers to advance knowledge in physical sciences and the use of physical analogies in computation. Topics covered include: algorithms; computational biophysics; computational fluid dynamics; statistical physics; complex systems; computer and information science; condensed matter physics, materials science; socio- and econophysics; data analysis and computation in experimental physics; environmental physics; traffic modelling; physical computation including neural nets, cellular automata and genetic algorithms.