In silico evaluation of the pharmacodynamic component of the interaction of S-alkyl derivatives of 5-methyl-4-(p-tolyl)-1,2,4-triazole-3-thiol with some biological targets

O. Panasenko, V. M. Odyntsova, A. S. Hotsulia
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Abstract

Derivatives of 1,2,4-triazole open wide opportunities for modern and progressive scientists in the development of innovative medicines. These compounds are known for their variability and structural flexibility, which allows scientists to experiment and create new molecules with unique properties. The use of 1,2,4-triazole derivatives in the creation of drugs is based on their ability to interact with biological systems and molecular targets. These compounds can be aimed at regulating physiological processes, reducing manifestations of pathological conditions or enhancing necessary biological reactions. Directed modification of the structure of 1,2,4-triazole derivatives allows to create biologically active compounds with improved properties. The aim of the work was to study in silico and to evaluate the possible interaction of a virtual series of S-alkyl derivatives of 5-methyl-4-(p-tolyl)-1,2,4-triazole-3-thiol with some enzyme systems. Materials and methods. A computer method (molecular docking) for predicting and evaluating the interaction between a ligand molecule and a target protein structure. Ligand preparation was performed using MarvinSketch 6.3.0, Hyper Chem 8, and AutoDockTools-1.5.6 programs. Enzyme preparation involved the use of Discovery Studio 4.0 and AutoDockTools-1.5.6 software packages. Direct molecular docking was performed using the Vina program. Results. A virtual series of S-alkyl derivatives of 5-methyl-4-(p-tolyl)-1,2,4-triazole-3-thiol with the potential possibility of creating a biologically active substance has been constructed. Using the Vina software tool, the nature and number of amino acid residues of the active centers of model enzymes, with which the proposed ligands coordinate and bind, were determined. According to the results of docking studies, the predicted affinity for lanosterol-14α-demethylase was determined. The effect on the receptor tyrosine kinase of anaplastic lymphoma is somewhat inferior in terms of qualitative and quantitative indicators. Conclusions. Using the method of molecular docking, it was established that S-alkyl derivatives of 5-methyl-4-(p-tolyl)-1,2,4-triazole-3-thiol have a fairly significant potential for the manifestation of antifungal activity, which justifies the further synthesis of these compounds and more in-depth study of fungistatic and fungicidal properties. Docking results for anaplastic lymphoma kinase show little promise in the development of anticancer agents.
对 5-甲基-4-(对甲苯基)-1,2,4-三唑-3-硫醇的 S-烷基衍生物与某些生物靶标相互作用的药效学成分进行硅学评估
1,2,4-三唑的衍生物为现代先进科学家开发创新药物提供了广阔的机遇。这些化合物以其可变性和结构灵活性而著称,这使得科学家们可以进行实验,创造出具有独特性质的新分子。1,2,4-三唑衍生物之所以能被用于制造药物,是因为它们能够与生物系统和分子靶点相互作用。这些化合物可用于调节生理过程、减轻病理症状或增强必要的生物反应。对 1,2,4-三唑衍生物的结构进行定向修饰,可以制造出具有更好特性的生物活性化合物。这项工作的目的是对 5-甲基-4-(对甲苯基)-1,2,4-三唑-3-硫醇的一系列 S-烷基虚拟衍生物与一些酶系统可能产生的相互作用进行硅学研究和评估。材料和方法采用计算机方法(分子对接)预测和评估配体分子与目标蛋白质结构之间的相互作用。配体制备使用 MarvinSketch 6.3.0、Hyper Chem 8 和 AutoDockTools-1.5.6 程序。酶的制备使用了 Discovery Studio 4.0 和 AutoDockTools-1.5.6 软件包。直接分子对接使用 Vina 程序进行。结果我们构建了一个 5-甲基-4-(对甲苯基)-1,2,4-三唑-3-硫醇的 S-烷基衍生物虚拟系列,该系列有可能产生一种生物活性物质。利用 Vina 软件工具,确定了模型酶活性中心氨基酸残基的性质和数量,拟议配体与之配位和结合。根据对接研究的结果,确定了与羊毛甾醇-14α-脱甲基酶的亲和力。从定性和定量指标来看,对无性淋巴瘤受体酪氨酸激酶的作用略逊一筹。结论。利用分子对接的方法,确定了 5-甲基-4-(对甲苯基)-1,2,4-三唑-3-硫醇的 S-烷基衍生物在抗真菌活性方面具有相当大的表现潜力,这为进一步合成这些化合物并更深入地研究其抑菌和杀菌特性提供了依据。针对无性淋巴瘤激酶的 Docking 结果表明,开发抗癌药物的前景并不乐观。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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