Utilizing machine learning to create a blood-based scoring system for sepsis detection

Sadik Aref
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Abstract

Introduction and aim. Sepsis, a disease caused by inflammation as a response to infection, often goes undiagnosed due to its heterogeneity and lack of a single diagnostic test. Current sepsis detection scoring systems have low sensitivity and utilize biomarkers that are difficult to obtain from a single test. The goal of this research is to create a scoring system that outperforms current industry standards by utilizing blood-based biomarkers readily available in hospital settings. Material and methods. Machine learning algorithms were run through Google Colab using Extreme Gradient Boost classifier. The dataset was obtained from NCBI website containing electronic hospital records of intensive care patients. A multivariate linear regression was applied to the dataset to determine statistically significant biomarkers in the detection of sepsis, and their β coefficients. Then, validation testing was performed, and the performance was compared to other scoring systems. Results. This experiment reveals that a sepsis detection system that utilizes procalcitonin, white blood cells, C-reactive protein, neutrophil to lymphocyte ratio, and albumin can outperform other biomarkers and scoring systems with high sensitivity at a recall score of 0.7922. Conclusion. These results demonstrate the potential of utilizing a blood-based scoring system for sepsis detection within hospital settings.
利用机器学习创建基于血液的败血症检测评分系统
导言和目的。败血症是一种由炎症引起的疾病,是对感染的一种反应,由于其异质性和缺乏单一的诊断测试,往往得不到诊断。目前的败血症检测评分系统灵敏度较低,而且利用的生物标志物难以从单一检测中获得。本研究的目标是利用医院环境中随时可用的血液生物标志物,创建一个优于当前行业标准的评分系统。材料与方法通过 Google Colab 使用 Extreme Gradient Boost 分类器运行机器学习算法。数据集来自 NCBI 网站,其中包含重症监护患者的医院电子记录。对数据集进行多元线性回归,以确定在脓毒症检测中具有统计学意义的生物标志物及其β系数。然后进行验证测试,并将其性能与其他评分系统进行比较。结果实验结果表明,利用降钙素原、白细胞、C 反应蛋白、中性粒细胞与淋巴细胞比值和白蛋白的败血症检测系统能够以 0.7922 的召回分数超越其他生物标志物和评分系统,具有较高的灵敏度。结论这些结果表明,在医院环境中利用基于血液的评分系统检测败血症是有潜力的。
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