Mechanism of hydrophobic gating in the acetylcholine receptor channel pore.

IF 3.3 2区 医学 Q1 PHYSIOLOGY
Journal of General Physiology Pub Date : 2024-02-05 Epub Date: 2023-12-28 DOI:10.1085/jgp.202213189
Monika Kumari, Nadira Khatoon, Rachita Sharma, Sushanth Adusumilli, Anthony Auerbach, Hemant K Kashyap, Tapan K Nayak
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引用次数: 0

Abstract

Neuromuscular acetylcholine receptors (AChRs) are hetero-pentameric, ligand-gated ion channels. The binding of the neurotransmitter acetylcholine (ACh) to two target sites promotes a global conformational change of the receptor that opens the channel and allows ion conduction through the channel pore. Here, by measuring free-energy changes from single-channel current recordings and using molecular dynamics simulations, we elucidate how a constricted hydrophobic region acts as a "gate" to regulate the channel opening in the pore of AChRs. Mutations of gate residues, including those implicated in congenital myasthenia syndrome, lower the permeation barrier of the channel substantially and increase the unliganded gating equilibrium constant (constitutive channel openings). Correlations between hydrophobicity and the observed free-energy changes, supported by calculations of water densities in the wild-type versus mutant channel pores, provide evidence for hydrophobic wetting-dewetting transition at the gate. The analysis of a coupled interaction network provides insight into the molecular mechanism of closed- versus open-state conformational changes at the gate. Studies of the transition state by "phi"(φ)-value analysis indicate that agonist binding serves to stabilize both the transition and the open state. Intersubunit interaction energy measurements and molecular dynamics simulations suggest that channel opening involves tilting of the pore-lining M2 helices, asymmetric outward rotation of amino acid side chains, and wetting transition of the gate region that lowers the barrier to ion permeation and stabilizes the channel open conformation. Our work provides new insight into the hydrophobic gate opening and shows why the gate mutations result in constitutive AChR channel activity.

乙酰胆碱受体通道孔的疏水门控机制。
神经肌肉乙酰胆碱受体(AChRs)是一种异源五聚体配体门控离子通道。神经递质乙酰胆碱(ACh)与两个目标位点的结合会促进受体发生整体构象变化,从而打开通道并允许离子通过通道孔进行传导。在这里,我们通过测量单通道电流记录的自由能变化并利用分子动力学模拟,阐明了收缩的疏水区域如何作为 "闸门 "调节 AChRs 孔道的通道开放。门残基的突变,包括那些与先天性肌无力综合症有关的突变,会大大降低通道的通透屏障,并增加未加载配体的门平衡常数(组成型通道开放)。疏水性与观察到的自由能变化之间的相关性,在野生型与突变型通道孔隙中水密度计算的支持下,为栅极的疏水润湿-润湿转换提供了证据。通过对耦合相互作用网络的分析,可以深入了解栅极处封闭态与开放态构象变化的分子机制。通过 "phi"(φ)值分析对过渡态的研究表明,激动剂的结合可稳定过渡态和开放态。亚基内相互作用能量测量和分子动力学模拟表明,通道开放涉及到衬孔 M2 螺旋的倾斜、氨基酸侧链的不对称外旋以及栅极区域的润湿转换,从而降低了离子渗透的障碍并稳定了通道的开放构象。我们的研究为疏水性栅极开放提供了新的见解,并说明了为什么栅极突变会导致组成型 AChR 通道活性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
6.00
自引率
10.50%
发文量
88
审稿时长
6-12 weeks
期刊介绍: General physiology is the study of biological mechanisms through analytical investigations, which decipher the molecular and cellular mechanisms underlying biological function at all levels of organization. The mission of Journal of General Physiology (JGP) is to publish mechanistic and quantitative molecular and cellular physiology of the highest quality, to provide a best-in-class author experience, and to nurture future generations of independent researchers. The major emphasis is on physiological problems at the cellular and molecular level.
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