A machine learning-based high-precision density functional method for drug-like molecules

Jin Xiao , YiXiao Chen , LinFeng Zhang , Han Wang , Tong Zhu
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Abstract

In computer-aided drug discovery, accurately determining the structure and properties of drug-like molecules is of utmost importance. This necessitates the use of precise and efficient electronic structure methods. Here, we developed two deep learning-based density functional methods, namely DeePHF and DeePKS, specifically tailored for drug-like molecules. Notably, DeePKS incorporates self-consistency into its framework. With a limited dataset labelled at the CCSD(T)/def2-TZVP level, both models have been able to achieve chemical accuracy in calculating molecular energies and have demonstrated excellent transferability. We anticipate that further advancements in this field will lead to the development of high-quality density functional methods designed specifically for drug discovery purposes. This research showcases the capabilities of deep learning approaches in simplifying the construction complexity associated with traditional DFT methods.

基于机器学习的类药物分子高精度密度泛函方法
在计算机辅助药物发现中,准确确定类药物分子的结构和性质至关重要。这就需要使用精确高效的电子结构方法。在此,我们开发了两种基于深度学习的密度泛函方法,即 DeePHF 和 DeePKS,专门针对类药物分子。值得注意的是,DeePKS 在其框架中加入了自洽性。通过在 CCSD(T)/def2-TZVP 水平上标记的有限数据集,这两种模型在计算分子能量时都能达到化学准确性,并表现出出色的可移植性。我们预计,这一领域的进一步发展将导致专为药物发现目的而设计的高质量密度泛函方法的开发。这项研究展示了深度学习方法在简化与传统 DFT 方法相关的构造复杂性方面的能力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Artificial intelligence chemistry
Artificial intelligence chemistry Chemistry (General)
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