Nikita Frolov, Bram Bijnens, Daniel Ruiz-Reynés, Lendert Gelens
{"title":"Self-organization of microtubules: complexity analysis of emergent patterns","authors":"Nikita Frolov, Bram Bijnens, Daniel Ruiz-Reynés, Lendert Gelens","doi":"arxiv-2305.00539","DOIUrl":null,"url":null,"abstract":"Microtubules self-organize to structure part of the cellular cytoskeleton. As\nsuch they give cells their shape and play a crucial role in cell division and\nintracellular transport. Past studies have identified diverse spatio-temporal\npatterns into which microtubules can organize when driven by motor proteins.\nThe question remains if there is an appropriate way to quantify these\nstructures and gain new knowledge about the physical principles of\nself-organization in microtubule-motor mixtures. Here, we aim to approach this\nproblem from a complexity science perspective. We introduce an entropy-based\nmeasure to evaluate the structural complexity of spatial patterns emerging in a\nsimplified agent-based computational model of a microtubule-motor interactions.\nOur results demonstrate that the proposed quantifier discriminates well between\nordered, disordered, and intermediate structures. Besides, our study indicates\nthat the transition to steady states in such a system is likely to be\ndiscontinuous and exhibits distinct properties of self-organized criticality.","PeriodicalId":501170,"journal":{"name":"arXiv - QuanBio - Subcellular Processes","volume":"75 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2023-04-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"arXiv - QuanBio - Subcellular Processes","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/arxiv-2305.00539","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
Microtubules self-organize to structure part of the cellular cytoskeleton. As
such they give cells their shape and play a crucial role in cell division and
intracellular transport. Past studies have identified diverse spatio-temporal
patterns into which microtubules can organize when driven by motor proteins.
The question remains if there is an appropriate way to quantify these
structures and gain new knowledge about the physical principles of
self-organization in microtubule-motor mixtures. Here, we aim to approach this
problem from a complexity science perspective. We introduce an entropy-based
measure to evaluate the structural complexity of spatial patterns emerging in a
simplified agent-based computational model of a microtubule-motor interactions.
Our results demonstrate that the proposed quantifier discriminates well between
ordered, disordered, and intermediate structures. Besides, our study indicates
that the transition to steady states in such a system is likely to be
discontinuous and exhibits distinct properties of self-organized criticality.