Shachi Mittal , Tomasz P. Wrobel , Michael Walsh , Andre Kajdacsy-Balla , Rohit Bhargava
{"title":"Breast cancer histopathology using infrared spectroscopic imaging: The impact of instrumental configurations","authors":"Shachi Mittal , Tomasz P. Wrobel , Michael Walsh , Andre Kajdacsy-Balla , Rohit Bhargava","doi":"10.1016/j.clispe.2021.100006","DOIUrl":null,"url":null,"abstract":"<div><p>Digital analysis of cancer specimens using spectroscopic imaging coupled to machine learning is an emerging area that links spatially localized spectral signatures to tissue structure and disease. In this study, we examine the role of spatial-spectral tradeoffs in infrared spectroscopic imaging configurations for probing tumors and the associated microenvironment profiles at different levels of model complexity. We image breast tissue using standard and high-definition Fourier Transform Infrared (FT-IR) imaging and systematically examine the localization, spectral origins, and utility of data for classification. Results demonstrate that higher spatial detail provides high sensitivity and specificity of tissue segmentation, despite the increased subcellular variability. High definition imaging also allows accurate analysis of complex, multiclass models of breast tissue without compromising accuracy. A comparison of results also highlights the key differences in the data distributions and classification performance across modalities to better guide decision making for acquiring and analyzing IR imaging data for specific histopathological models.</p></div>","PeriodicalId":100277,"journal":{"name":"Clinical Spectroscopy","volume":"3 ","pages":"Article 100006"},"PeriodicalIF":0.0000,"publicationDate":"2021-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.clispe.2021.100006","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Clinical Spectroscopy","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2666054721000016","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
Digital analysis of cancer specimens using spectroscopic imaging coupled to machine learning is an emerging area that links spatially localized spectral signatures to tissue structure and disease. In this study, we examine the role of spatial-spectral tradeoffs in infrared spectroscopic imaging configurations for probing tumors and the associated microenvironment profiles at different levels of model complexity. We image breast tissue using standard and high-definition Fourier Transform Infrared (FT-IR) imaging and systematically examine the localization, spectral origins, and utility of data for classification. Results demonstrate that higher spatial detail provides high sensitivity and specificity of tissue segmentation, despite the increased subcellular variability. High definition imaging also allows accurate analysis of complex, multiclass models of breast tissue without compromising accuracy. A comparison of results also highlights the key differences in the data distributions and classification performance across modalities to better guide decision making for acquiring and analyzing IR imaging data for specific histopathological models.