P037 The Big Sleep ACT Project: Developing a Modern Dataset to Support Sleep Research

N Malagutti, L Chen, S Miller
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Abstract

Abstract Background Limitations in scale, population diversity, technical quality, data curation methods and accessibility of existing data resources have been recognised as limiting factors for the advancement of sleep clinical research through big data approaches. To bridge this gap, this study introduces a new sleep dataset which seeks to capture a data-rich, longitudinal snapshot of a representative Australian clinical sleep cohort. Methods Retrospective collation of de-identified sleep clinical records from adult patients who underwent at least one in-lab Type-1 polysomnography between 2012 and 2018 at Canberra Sleep Clinic. We extracted polysomnography raw signals and annotations, as well as medical record information including basic demographics, comorbidities, medications, examination findings, diagnoses, therapy settings and follow-up observations throughout subjects’ time in the Clinic’s care. Records were organised according to a graph database structure, embedding SNOMED terminology encodings wherever possible. Results N=6,777 subjects were included. Gender split (M/F: 62%/38%) and age (51.7±15.3 years) distribution were consistent with typical clinical sleep cohorts. Polysomnography recordings included diagnostic (n=6,635) and non-invasive ventilation titration/therapy (n=2,834), as well as MSLT (n=270) and MWT (n=25) studies. Clinical subgroups featured healthy, Obstructive Sleep Apnea (OSA) and non-OSA dyssomnia patients, as well as small cohort of parasomnia cases. Follow-up duration varied among cases (<3 months to >5 years). Discussion Despite limitations associated with retrospective data extraction, the data-richness and scale of Big Sleep ACT compare favourably with world-leading sleep datasets. Careful data organisation makes this dataset well placed to support innovative data-driven research into precise diagnoses, personalised interventions, and automation in sleep medicine.
大睡眠ACT项目:开发支持睡眠研究的现代数据集
在规模、人口多样性、技术质量、数据管理方法和现有数据资源的可及性等方面的限制已被认为是通过大数据方法推进睡眠临床研究的限制因素。为了弥补这一差距,本研究引入了一个新的睡眠数据集,旨在捕捉具有代表性的澳大利亚临床睡眠队列的数据丰富的纵向快照。方法回顾性整理2012年至2018年在堪培拉睡眠诊所接受至少一次实验室1型多导睡眠图检查的成年患者的睡眠临床记录。我们提取了多导睡眠图的原始信号和注释,以及医疗记录信息,包括基本人口统计、合并症、药物、检查结果、诊断、治疗设置和随访观察,贯穿受试者在诊所的整个护理时间。记录按照图形数据库结构组织,尽可能嵌入SNOMED术语编码。结果纳入N= 6777名受试者。性别分布(男/女:62%/38%)和年龄分布(51.7±15.3岁)与典型临床睡眠队列一致。多导睡眠图记录包括诊断(n=6,635)和无创通气滴定/治疗(n=2,834),以及MSLT (n=270)和MWT (n=25)研究。临床亚组包括健康、阻塞性睡眠呼吸暂停(OSA)和非OSA睡眠障碍患者,以及一小部分睡眠异常病例。随访时间因病例而异(3个月至5年)。尽管与回顾性数据提取相关的局限性,大睡眠ACT的数据丰富性和规模可与世界领先的睡眠数据集相媲美。仔细的数据组织使该数据集能够很好地支持数据驱动的创新研究,以精确诊断、个性化干预和睡眠医学自动化。
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