Molecular Characterization in 3D Structure of MicroRNA Expressed in Leprosy

Luis Jesuino de Oliveira Andrade, Humberto Barreto de Jesus, Luís Matos de Oliveira, Moema Farias de Oliveira, Laura Farias Caricchio Santana, Gabriela Correia Matos de Oliveira
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 Objective: In silico design of the molecular structure of miRNAs expressed in leprosy. Method: We performed a nucleotide sequence search of 17 miRNAs expressed in leprosy, designing in silico the molecular structure of the following miRNAs: miRNA-26a, miRNA-27a, miRNA-27b, miRNA-29c, miRNA-34c, miRNA-92a-1, miRNA-99a-2, miRNA-101-1, miRNA-101-2, miRNA-125b-1, miRNA-196b, miRNA-425-5p, miRNA-452, miRNA-455, miRNA-502, miRNA-539, and miRNA-660. We extracted the nucleotides were from the GenBank of National Center for Biotechnology Information genetic sequence database. We aligned the extracted sequences with the RNA Folding Form, and the three-dimensional molecular structure design was performed with the RNAComposer.
 Results: We demonstrate the nucleotide sequences, and molecular structure projection of miRNAs expressed in leprosy, and produces a tutorial on the molecular model of the 17 miRNAs expressed in leprosy through in silico projection processing of their molecular structures.
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Abstract

Introduction: Hansen's disease, or leprosy is caused by Mycobacterium leprae, is a major public health problem in developing countries, and affecting the skin and peripheral nerves. However, M. leprae can also affect bone tissue, mucous membranes, liver, eyes, and testicles, producing a variety of clinical phenotypes. MicroRNAs (miRNAs) have been expressed in the various clinical forms of leprosy and could potentially be used for its diagnosis. Objective: In silico design of the molecular structure of miRNAs expressed in leprosy. Method: We performed a nucleotide sequence search of 17 miRNAs expressed in leprosy, designing in silico the molecular structure of the following miRNAs: miRNA-26a, miRNA-27a, miRNA-27b, miRNA-29c, miRNA-34c, miRNA-92a-1, miRNA-99a-2, miRNA-101-1, miRNA-101-2, miRNA-125b-1, miRNA-196b, miRNA-425-5p, miRNA-452, miRNA-455, miRNA-502, miRNA-539, and miRNA-660. We extracted the nucleotides were from the GenBank of National Center for Biotechnology Information genetic sequence database. We aligned the extracted sequences with the RNA Folding Form, and the three-dimensional molecular structure design was performed with the RNAComposer. Results: We demonstrate the nucleotide sequences, and molecular structure projection of miRNAs expressed in leprosy, and produces a tutorial on the molecular model of the 17 miRNAs expressed in leprosy through in silico projection processing of their molecular structures. Conclusion: We demonstrate in silico design of selected molecular structures of 17 miRNAs expressed in leprosy through computational biology.
麻风病中表达的MicroRNA三维结构的分子表征
简介:麻风病是由麻风分枝杆菌引起的,是发展中国家的一个主要公共卫生问题,影响皮肤和周围神经。然而,麻风分枝杆菌也可影响骨组织、粘膜、肝脏、眼睛和睾丸,产生多种临床表型。MicroRNAs (miRNAs)已在各种临床形式的麻风病中表达,并有可能用于麻风病的诊断。目的:用计算机设计麻风病中表达的mirna分子结构。方法:对麻风病中表达的17个mirna进行核苷酸序列搜索,用计算机设计了以下mirna的分子结构:miRNA-26a、miRNA-27a、miRNA-27b、miRNA-29c、miRNA-34c、miRNA-92a-1、miRNA-99a-2、miRNA-101-1、miRNA-101-2、miRNA-125b-1、miRNA-196b、miRNA-425-5p、miRNA-452、miRNA-455、miRNA-502、miRNA-539和miRNA-660。我们从国家生物技术信息中心GenBank基因序列数据库中提取核苷酸。我们将提取的序列与RNA折叠形式进行比对,并使用RNAComposer进行三维分子结构设计。 结果:我们展示了麻风病中表达的mirna的核苷酸序列和分子结构投影,并通过对其分子结构的计算机投影处理,制作了麻风病中表达的17种mirna的分子模型教程。 结论:我们通过计算生物学在计算机上设计了麻风病中表达的17种mirna的分子结构。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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