ENGINEERING THE N-TERMINAL SEQUENCE OF GLYCINE MAX SOYBEAN FORMATE DEHYDROGENASE

Leonid A. Shaposhnikov, Svyatoslav S. Savin, Denis L. Atroshenko, Tatyana A. Chubar, Evgenii V. Pometun, Vladimir I. Tishkov, Anastasia A. Pometun
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Abstract

NAD(P)+ -dependent formate dehydrogenase (FDH, EC 1.2.1.2.) catalyzes the oxidation of formate ion with the coupled reduction of NAD(P)+ to NAD(P)H. Previously, in our laboratory, a genetic construct was obtained with the soyfdh2 gene encoding isoenzyme 2 of formate dehydrogenase from soybean Glycine max (SoyFDH). In this construct the nucleotide sequence encoding the signal peptide responsible for the transport of the pro-enzyme into the mitochondria of plant cells (the SoyFDH_L enzyme) was deleted. In this work, a second variant of SoyFDH_S was obtained, in which, compared to SoyFDH_L, the sequence at the N-terminus was reduced and changed to mimic the N-terminus sequence in FDH from Pseudomonas sp.101 bacteria. Next, a sequence of six histidine residues (His-tag) was added to the N-terminus of the long and short forms of SoyFDH. All four SoyFDH variants were expressed in E. coli BL21(DE3)CodonPlus, these enzymes were purified, their kinetic parameters were determined, and thermal stability was studied. In the case of SoyFDH_L, which is similar to the natural variant of the enzyme, both with and without His-tag, the expression level is two times higher compared to the truncated variant. The addition of His-tag to the N-terminus of enzymes reduces the level of expression. Changing the sequence of the N-terminus, as well as introducing the His-tag sequence to the N-terminus, does not significantly affect thermal stability of the enzymes at temperatures of 50–56 °C. However, due to the higher values of the activation enthalpy ΔH≠ of the thermal inactivation process, the shortened form at normal temperatures is 3 times more stable than the natural one. A comparison of the kinetic parameters of the two SoyFDH variants shows that the catalytic constants are the same, but the long version of SoyFDH_L has lower values KM HCOO– , and the short version has lower KM NAD+ values. The introduction of His-tag into the N-terminus of enzymes does not affect their kinetic parameters.
甘氨酸Max大豆甲酸脱氢酶n端序列的工程设计
NAD(P)+依赖性甲酸脱氢酶(FDH, EC 1.2.1.2.)催化甲酸离子氧化,NAD(P)+偶联还原为NAD(P)H。先前,在我们的实验室中,获得了一个编码大豆甘氨酸max (SoyFDH)甲酸脱氢酶2同工酶的soyfdh2基因的遗传结构。在这种结构中,编码负责将前酶转运到植物细胞线粒体的信号肽(SoyFDH_L酶)的核苷酸序列被删除。在这项工作中,获得了SoyFDH_S的第二个变体,与SoyFDH_L相比,其n端序列减少并改变为模仿假单胞菌sp.101细菌FDH的n端序列。接下来,将6个组氨酸残基序列(His-tag)添加到长型和短型SoyFDH的n端。在大肠杆菌BL21(DE3)CodonPlus中表达了4种SoyFDH变体,对其进行了纯化,测定了其动力学参数,并对其热稳定性进行了研究。在SoyFDH_L的情况下,与该酶的天然变体相似,无论是否带有his标签,其表达水平都是截断变体的两倍。在酶的n端添加his标签降低了表达水平。在50-56℃的温度下,改变n端序列以及将his标签序列引入n端对酶的热稳定性没有显著影响。但由于热失活过程的活化焓ΔH≠较高,常温下缩短后的形式比自然形式稳定3倍。比较两种SoyFDH变体的动力学参数发现,两种变体的催化常数相同,但长型SoyFDH_L具有较低的KM HCOO -值,短型SoyFDH_L具有较低的KM NAD+值。在酶的n端引入his标签并不影响其动力学参数。
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