A Robust Deep Learning Approach for Accurate Segmentation of Cytoplasm and Nucleus in Noisy Pap Smear Images

IF 1.9 Q2 MATHEMATICS, INTERDISCIPLINARY APPLICATIONS
Nahida Nazir, Abid Sarwar, Baljit Singh Saini, Rafeeya Shams
{"title":"A Robust Deep Learning Approach for Accurate Segmentation of Cytoplasm and Nucleus in Noisy Pap Smear Images","authors":"Nahida Nazir, Abid Sarwar, Baljit Singh Saini, Rafeeya Shams","doi":"10.3390/computation11100195","DOIUrl":null,"url":null,"abstract":"Cervical cancer poses a significant global health burden, affecting women worldwide. Timely and accurate detection is crucial for effective treatment and improved patient outcomes. The Pap smear test has long been a standard cytology screening method, enabling early cancer diagnosis. However, to enhance quantitative analysis and refine diagnostic capabilities, precise segmentation of the cervical cytoplasm and nucleus using deep learning techniques holds immense promise. This research focuses on addressing the primary challenge of achieving accurate segmentation in the presence of noisy data commonly encountered in Pap smear images. Poisson noise, a prevalent type of noise, corrupts these images, impairing the precise delineation of the cytoplasm and nucleus. Consequently, segmentation boundaries become indistinct, leading to compromised overall accuracy. To overcome these limitations, the utilization of U-Net, a deep learning architecture specifically designed for automatic segmentation, has been proposed. This approach aims to mitigate the adverse effects of Poisson noise on the digitized Pap smear slides. The evaluation of the proposed methodology involved a dataset of 110 Pap smear slides. The experimental results demonstrate that the proposed approach successfully achieves precise segmentation of the nucleus and cytoplasm in noise-free images. By preserving the boundaries of both cellular components, the method facilitates accurate feature extraction, thus contributing to improved diagnostic capabilities. Comparative analysis between noisy and noise-free images reveals the superiority of the presented approach in terms of segmentation accuracy, as measured by various metrics, including the Dice coefficient, specificity, sensitivity, and intersection over union (IoU). The findings of this study underline the potential of deep-learning-based segmentation techniques to enhance cervical cancer diagnosis and pave the way for improved quantitative analysis in this critical field of women’s health.","PeriodicalId":52148,"journal":{"name":"Computation","volume":"27 1","pages":"0"},"PeriodicalIF":1.9000,"publicationDate":"2023-10-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computation","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.3390/computation11100195","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"MATHEMATICS, INTERDISCIPLINARY APPLICATIONS","Score":null,"Total":0}
引用次数: 0

Abstract

Cervical cancer poses a significant global health burden, affecting women worldwide. Timely and accurate detection is crucial for effective treatment and improved patient outcomes. The Pap smear test has long been a standard cytology screening method, enabling early cancer diagnosis. However, to enhance quantitative analysis and refine diagnostic capabilities, precise segmentation of the cervical cytoplasm and nucleus using deep learning techniques holds immense promise. This research focuses on addressing the primary challenge of achieving accurate segmentation in the presence of noisy data commonly encountered in Pap smear images. Poisson noise, a prevalent type of noise, corrupts these images, impairing the precise delineation of the cytoplasm and nucleus. Consequently, segmentation boundaries become indistinct, leading to compromised overall accuracy. To overcome these limitations, the utilization of U-Net, a deep learning architecture specifically designed for automatic segmentation, has been proposed. This approach aims to mitigate the adverse effects of Poisson noise on the digitized Pap smear slides. The evaluation of the proposed methodology involved a dataset of 110 Pap smear slides. The experimental results demonstrate that the proposed approach successfully achieves precise segmentation of the nucleus and cytoplasm in noise-free images. By preserving the boundaries of both cellular components, the method facilitates accurate feature extraction, thus contributing to improved diagnostic capabilities. Comparative analysis between noisy and noise-free images reveals the superiority of the presented approach in terms of segmentation accuracy, as measured by various metrics, including the Dice coefficient, specificity, sensitivity, and intersection over union (IoU). The findings of this study underline the potential of deep-learning-based segmentation techniques to enhance cervical cancer diagnosis and pave the way for improved quantitative analysis in this critical field of women’s health.
噪声巴氏涂片图像中细胞质和细胞核精确分割的鲁棒深度学习方法
宫颈癌对全球妇女造成重大健康负担。及时和准确的检测对于有效治疗和改善患者预后至关重要。巴氏涂片检查长期以来一直是一种标准的细胞学筛查方法,可用于早期癌症诊断。然而,为了增强定量分析和完善诊断能力,使用深度学习技术对宫颈细胞质和细胞核进行精确分割具有巨大的前景。本研究的重点是解决在巴氏涂片图像中经常遇到的噪声数据存在的情况下实现准确分割的主要挑战。泊松噪声是一种常见的噪声,它破坏了这些图像,损害了细胞质和细胞核的精确描绘。因此,分割边界变得模糊,导致整体精度受损。为了克服这些限制,提出了一种专门为自动分割设计的深度学习架构U-Net。该方法旨在减轻泊松噪声对数字化巴氏涂片的不利影响。对拟议方法的评估涉及110个巴氏涂片的数据集。实验结果表明,该方法成功地实现了无噪声图像中细胞核和细胞质的精确分割。通过保留两个细胞成分的边界,该方法有助于准确的特征提取,从而有助于提高诊断能力。通过对有噪声和无噪声图像的对比分析,揭示了该方法在分割精度方面的优势,该方法可以通过各种指标来衡量,包括Dice系数、特异性、灵敏度和交联(IoU)。这项研究的结果强调了基于深度学习的分割技术在增强宫颈癌诊断方面的潜力,并为改进妇女健康这一关键领域的定量分析铺平了道路。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Computation
Computation Mathematics-Applied Mathematics
CiteScore
3.50
自引率
4.50%
发文量
201
审稿时长
8 weeks
期刊介绍: Computation a journal of computational science and engineering. Topics: computational biology, including, but not limited to: bioinformatics mathematical modeling, simulation and prediction of nucleic acid (DNA/RNA) and protein sequences, structure and functions mathematical modeling of pathways and genetic interactions neuroscience computation including neural modeling, brain theory and neural networks computational chemistry, including, but not limited to: new theories and methodology including their applications in molecular dynamics computation of electronic structure density functional theory designing and characterization of materials with computation method computation in engineering, including, but not limited to: new theories, methodology and the application of computational fluid dynamics (CFD) optimisation techniques and/or application of optimisation to multidisciplinary systems system identification and reduced order modelling of engineering systems parallel algorithms and high performance computing in engineering.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信