EMU-Net: Automatic Brain Tumor Segmentation and Classification Using Efficient Modified U-Net

Mohammed Aly, Abdullah Shawan Alotaibi
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Abstract

Tumor segmentation is a valuable tool for gaining insights into tumors and improving treatment outcomes. Manual segmentation is crucial but time-consuming. Deep learning methods have emerged as key players in automating brain tumor segmentation. In this paper, we propose an efficient modified U-Net architecture, called EMU-Net, which is applied to the BraTS 2020 dataset. Our approach is organized into two distinct phases: classification and segmentation. In this study, our proposed approach encompasses the utilization of the gray-level co-occurrence matrix (GLCM) as the feature extraction algorithm, convolutional neural networks (CNNs) as the classification algorithm, and the chi-square method for feature selection. Through simulation results, the chi-square method for feature selection successfully identifies and selects four GLCM features. By utilizing the modified U-Net architecture, we achieve precise segmentation of tumor images into three distinct regions: the whole tumor (WT), tumor core (TC), and enhanced tumor (ET). The proposed method consists of two important elements: an encoder component responsible for down-sampling and a decoder component responsible for up-sampling. These components are based on a modified U-Net architecture and are connected by a bridge section. Our proposed CNN architecture achieves superior classification accuracy compared to existing methods, reaching up to 99.65%. Additionally, our suggested technique yields impressive Dice scores of 0.8927, 0.9405, and 0.8487 for the tumor core, whole tumor, and enhanced tumor, respectively. Ultimately, the method presented demonstrates a higher level of trustworthiness and accuracy compared to existing methods. The promising accuracy of the EMU-Net study encourages further testing and evaluation in terms of extrapolation and generalization.
EMU-Net:基于高效改进U-Net的脑肿瘤自动分割与分类
肿瘤分割是深入了解肿瘤和改善治疗效果的重要工具。手动分割很重要,但很耗时。深度学习方法已成为自动化脑肿瘤分割的关键参与者。在本文中,我们提出了一种有效的改进U-Net架构,称为EMU-Net,并将其应用于BraTS 2020数据集。我们的方法分为两个不同的阶段:分类和分割。在本研究中,我们提出的方法包括利用灰度共生矩阵(GLCM)作为特征提取算法,卷积神经网络(cnn)作为分类算法,以及卡方方法进行特征选择。通过仿真结果,卡方特征选择方法成功地识别并选择了4个GLCM特征。利用改进的U-Net结构,我们将肿瘤图像精确分割为三个不同的区域:肿瘤整体(WT)、肿瘤核心(TC)和增强肿瘤(ET)。所提出的方法由两个重要元素组成:负责下采样的编码器组件和负责上采样的解码器组件。这些组件基于改进的U-Net架构,并通过桥接部分连接。与现有方法相比,我们提出的CNN架构的分类准确率达到了99.65%。此外,我们建议的技术对肿瘤核心、整个肿瘤和增强肿瘤的Dice得分分别为0.8927、0.9405和0.8487,令人印象深刻。最后,与现有方法相比,该方法具有更高的可信度和准确性。EMU-Net研究有希望的准确性鼓励在外推和推广方面进一步测试和评估。
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