An agent-based model to simulate the transmission dynamics of bloodborne pathogens within hospitals

Paul Henriot, Mohamed El Kassas, Wagida Anwar, Samia Girgis, Kevin Jean, Laura Temime
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Abstract

Bloodborne pathogens are a major public health concern as they can lead to a variety of medical conditions, including cirrhosis and cancers with significant mortality and morbidity. Three viruses are of major concern: HCV, HBV and HIV. Their transmission is mostly community-associated but the iatrogenic risk of infection is not negligible, even today. Mathematical models are widely used to describe and assess pathogens transmission, within communities and hospitals. Nevertheless, few are focusing on the transmission of pathogens through blood and even fewer on their transmission within hospital as they usually study the risk of community-associated infection in vulnerable populations such as MSM or drug users. Herein, we propose an agent- based SEI (Susceptible-Exposed-Infected) model to explore the transmission dynamics of bloodborne pathogens within hospitals. This model simulates the dynamics of patients between hospital wards, from their admission to discharge, as well as the dynamics of the devices used during at-risk invasive procedures, considering that patient contamination occurs after exposure to a contaminated device. Multiple parameters of the model, such as HCV prevalence, transition probabilities between wards or ward-specific probabilities of undergoing different invasive procedures, were informed with data collected in the University Hospital of Ain Shams in Cairo, Egypt in 2017. We explored the effect of device shortage as well as the effect of random and systematic screening with associated modification in disinfection practices on the risk of infection for patients. By modifying some parameters of the model, we then explored the case of HBV in Ethiopia. In the future, this model could be used to assess the risk of transmission of other bloodborne pathogens in other contexts.
一个基于主体的模型来模拟医院内血源性病原体的传播动态
血源性病原体是一个主要的公共卫生问题,因为它们可导致各种医疗状况,包括肝硬化和癌症,具有很高的死亡率和发病率。主要关注三种病毒:HCV、HBV和HIV。它们的传播主要与社区有关,但即使在今天,感染的医源性风险也不容忽视。数学模型被广泛用于描述和评估病原体在社区和医院内的传播。然而,很少有人关注病原体通过血液的传播,更少有人关注其在医院内的传播,因为他们通常研究的是弱势群体(如男男性接触者或吸毒者)社区相关感染的风险。在此,我们提出了一个基于药物的SEI(易感-暴露-感染)模型来探索血源性病原体在医院内的传播动态。该模型模拟了医院病房之间患者从入院到出院的动态变化,以及在有风险的侵入性手术过程中使用的设备的动态变化,考虑到患者在暴露于受污染的设备后会受到污染。该模型的多个参数,如HCV患病率、病房间转移概率或接受不同侵入性手术的病房特定概率,由2017年在埃及开罗艾因沙姆斯大学医院收集的数据提供。我们探讨了设备短缺的影响,以及随机和系统筛查与相关的消毒实践修改对患者感染风险的影响。通过修改模型的一些参数,我们随后探讨了埃塞俄比亚的HBV病例。在未来,该模型可用于评估其他情况下其他血源性病原体传播的风险。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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