Nonequilibrium steady states in coupled asymmetric and symmetric exclusion processes

Atri Goswami, Utsa Dey, Sudip Mukherjee
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Abstract

We propose and study a one-dimensional (1D) model consisting of two lanes with open boundaries. One of the lanes executes diffusive and the other lane driven unidirectional or asymmetric exclusion dynamics, which are mutually coupled through particle exchanges in the bulk. We elucidate the generic nonuniform steady states in this model. We show that in a parameter regime, where hopping along the TASEP lane, diffusion along the SEP lane, and the exchange of particles between the TASEP and SEP lanes compete, the SEP diffusivity $D$ appears as a tuning parameter for both the SEP and TASEP densities for a given exchange rate in the nonequilibrium steady states of this model. Indeed, $D$ can be tuned to achieve phase coexistence in the asymmetric exclusion dynamics together with spatially smoothly varying density in the diffusive dynamics in the steady state. We obtain phase diagrams of the model using mean field theories, and corroborate and complement the results with stochastic Monte Carlo simulations. This model reduces to an isolated open totally asymmetric exclusion process (TASEP) and an open TASEP with bulk particle nonconserving Langmuir kinetics (LK), respectively, in the limits of vanishing and diverging particle diffusivity in the lane executing diffusive dynamics. Thus, this model works as an overarching general model, connecting both pure TASEPs and TASEPs with LK in different asymptotic limits. We further define phases in the SEP and obtain phase diagrams and show their correspondence with the TASEP phases. In addition to its significance as a 1D driven, diffusive model, this model also serves as a simple reduced model for cell biological transport by molecular motors undergoing diffusive and directed motion inside eukaryotic cells.
耦合不对称和对称不相容过程中的非平衡态
我们提出并研究了一个由开放边界的两车道组成的一维(1D)模型。其中一条通道执行扩散动力学,另一条通道驱动单向或不对称排斥动力学,它们通过体内粒子交换相互耦合。我们阐明了该模型的一般非均匀稳态。我们证明了在一个参数体系中,沿着TASEP通道跳跃,沿着SEP通道扩散,以及在TASEP和SEP通道之间的粒子交换竞争,在该模型的非平衡稳态中,给定交换率下,SEP扩散率$D$作为SEP和TASEP密度的调谐参数出现。事实上,在非对称不相容动力学中,通过调整D可以实现相共存,同时在稳态扩散动力学中,可以实现密度的空间平滑变化。我们利用平均场理论得到了模型的相图,并用随机蒙特卡罗模拟对结果进行了证实和补充。在执行扩散动力学的通道中,在粒子扩散率消失和发散的极限下,该模型分别简化为孤立的开放的完全不对称不相容过程(TASEP)和具有体粒子非守恒朗缪尔动力学(LK)的开放TASEP。因此,该模型作为一个总体的一般模型,将纯tasep和具有LK的tasep在不同的渐近极限下连接起来。我们进一步定义了SEP中的相,得到了相图,并显示了它们与TASEP相的对应关系。除了作为一维驱动的扩散模型的意义外,该模型还可以作为真核细胞内分子马达进行扩散和定向运动的细胞生物运输的简单简化模型。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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