OPAL: An Open-Source MPI-IO Library over Cray XT

Weikuan Yu, J. Vetter, R. S. Canon
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引用次数: 11

Abstract

Parallel I/O over Cray XT is supported by a vendor-supplied MPI-IO package. This package contains a proprietary ADIO implementation built on top of the sysio library. While it is reasonable to maintain a stable code base for users' convenience, it is also very important for the system developers and researchers to analyze and assess the effectiveness of parallel I/O software, and accordingly, tune and optimize the MPI-IO implementation. A proprietary parallel I/O code base relinquishes such flexibilities. On the other hand, a generic UFS-based MPI-IO implementation is typically used on many Linux-based platforms, which lacks of the capability of utilizing Lustre specific features. We have developed an open- source MPI-IO package over Lustre, referred to as OPAL (Opportunistic and Adaptive MPI-IO Library over Lustre). OPAL provides a single source-code base for MPI-IO over Lustre on both the Cray XT and Linux platforms. It provides a number of good features, including arbitrary specification of striping patterns and Lustre-stripe aligned file domain partitioning. This paper presents the performance comparisons between OPAL and Cray's proprietary implementation. Our evaluation demonstrates that OPAL achieves the performance comparable to the Cray implementation. We also exemplify the benefits of OPAL in profiling the internal time breakdown of the collective I/O protocol over Cray XT.
OPAL:基于Cray XT的开源MPI-IO库
Cray XT上的并行I/O由供应商提供的MPI-IO包支持。这个包包含一个建立在sysio库之上的专有ADIO实现。为了方便用户使用,维护一个稳定的代码库是合理的,但对于系统开发人员和研究人员来说,分析和评估并行I/O软件的有效性,从而对MPI-IO实现进行调优和优化也是非常重要的。专有的并行I/O代码库放弃了这种灵活性。另一方面,通用的基于ufs的MPI-IO实现通常在许多基于linux的平台上使用,它缺乏利用Lustre特定特性的能力。我们在Lustre上开发了一个开源MPI-IO包,称为OPAL (Opportunistic and Adaptive MPI-IO Library over Lustre)。OPAL在Cray XT和Linux平台上为Lustre上的MPI-IO提供了一个单一的源代码库。它提供了许多很好的特性,包括条带模式的任意规范和与Lustre-stripe对齐的文件域分区。本文介绍了OPAL和Cray专有实现之间的性能比较。我们的评估表明,OPAL达到了与Cray实现相当的性能。我们还举例说明了OPAL在分析Cray XT上的集体I/O协议的内部时间分解方面的好处。
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