Reliable detection of viable Salmonella enterica from inoculated chicken samples by fluorescent in situ hybridization (FISH) with vivification step

R. Rathnayaka, S. Rakshit
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Abstract

Inspection of food for the presence of Salmonella is a major concern in food industry. Many rapid, reliable and sensitive novel methods have been developed to detect Salmonella from food samples. However a method to detect live bacterial cells separately from dead cells yet to be developed. Although fluorescent in situ hybridization (FISH) has been identified as promising method in this regards, the viable count could be overestimated by FISH technique due to dead cells with some amount of non degraded rRNA. Some times it could be underestimated because of inactive but viable cells which not produce detectable amount of rRNA. The possibility of using antibiotic treatment step in FISH technique to overcome this problem was studied. Chicken samples inoculated by differently prepared mixtures of live and heat killed Salmonella enterica cultures were used to isolate bacterial cells with and without antibiotic treatment (Nalidixic acid 10μg/ml and Ciprofloxacin 1μg/ml for 2h at 370C). FISH was performed with Salmonella specific 23S rRNA probe Sal3, 5’-AATCACTTCACCTACGTG-3’ labeled with fluorescein isothiocyanate (FITC) at 5’ end. Cells observed with high intensity under fluorescent microscope were identified as live cells. Results of statistical analysis for antibiotic treated and untreated samples indicated that the introduction of antibiotic treatment step in FISH technique permitted a successful application to over come the problem associated with viable Salmonella enterica detection and quantification. DOI: http://dx.doi.org/10.4038/suslj.v11i1.5868 Sabaragamuwa University Journal 2012; V. 11 No. 1 pp 13-19
采用荧光原位杂交(FISH)和活化步骤可靠地检测鸡接种样品中的活菌
检查食品是否存在沙门氏菌是食品工业关注的主要问题。目前已有许多快速、可靠、灵敏的食品沙门氏菌检测新方法。然而,一种将活细菌细胞与死细胞分开检测的方法尚未开发。尽管荧光原位杂交(FISH)已被认为是一种很有前途的方法,但由于死细胞中含有一定量的未降解rRNA,因此FISH技术可能会高估活菌计数。有时它可能被低估,因为不活跃但有活力的细胞不能产生可检测到的rRNA。研究了在FISH技术中采用抗生素处理步骤来克服这一问题的可能性。用不同制备的活菌和热杀菌混合培养物接种鸡样品,分别用抗生素(钠利地酸10μg/ml和环丙沙星1μg/ml)在370℃下培养2h,分离细菌细胞。FISH采用沙门氏菌特异性23S rRNA探针sal3,5 ' -AATCACTTCACCTACGTG-3 ',在5 '端标记异硫氰酸荧光素(FITC)。荧光显微镜下高强度观察到的细胞为活细胞。对抗生素处理和未处理样品的统计分析结果表明,在FISH技术中引入抗生素处理步骤可以成功地解决与活菌肠沙门氏菌检测和定量相关的问题。DOI: http://dx.doi.org/10.4038/suslj.v11i1.5868 Sabaragamuwa University Journal 2012;11节,第1章,第13-19页
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