{"title":"Label-free viability detection of T-cells based on 2D bright-field microscopic images and deep learning","authors":"Bo Li, Zhi Song, Liujia Shi, Yutao Li, Duli Yu, Xiaoliang Guo","doi":"10.1117/12.2673564","DOIUrl":null,"url":null,"abstract":"The measurement of cell viability is critical in the biomedical field. It is currently accomplished by staining cells with various stains and then manually or with instruments such as counters counting dead or live cells. However, the cell staining step is relatively time-consuming, and the stain is toxic. The internal structure of the cells is destroyed after staining, resulting in valuable cells that cannot be reused later. We proposed a label-free cell detection algorithm based on 2D bright-field images of T-cells and deep learning in this work. When used, this method eliminates the need for staining operations on cells, and cell viability is determined directly from the detection of bright-field cell images. The method based on YOLOX deep learning analysis has an excellent detection performance on bright-field images of T-cells, and the framework achieves the mAP (mean average precision) of more than 96.31% after cell detection. Experimental results show that combining 2D cell bright-field images with deep neural networks can yield a new label-free method for cell analysis.","PeriodicalId":231020,"journal":{"name":"Biophysical Society of Guang Dong Province Academic Forum - Precise Photons and Life Health","volume":"68 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2023-04-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biophysical Society of Guang Dong Province Academic Forum - Precise Photons and Life Health","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1117/12.2673564","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
The measurement of cell viability is critical in the biomedical field. It is currently accomplished by staining cells with various stains and then manually or with instruments such as counters counting dead or live cells. However, the cell staining step is relatively time-consuming, and the stain is toxic. The internal structure of the cells is destroyed after staining, resulting in valuable cells that cannot be reused later. We proposed a label-free cell detection algorithm based on 2D bright-field images of T-cells and deep learning in this work. When used, this method eliminates the need for staining operations on cells, and cell viability is determined directly from the detection of bright-field cell images. The method based on YOLOX deep learning analysis has an excellent detection performance on bright-field images of T-cells, and the framework achieves the mAP (mean average precision) of more than 96.31% after cell detection. Experimental results show that combining 2D cell bright-field images with deep neural networks can yield a new label-free method for cell analysis.
细胞活力的测量在生物医学领域至关重要。目前的方法是用各种染色剂对细胞进行染色,然后手动或用计数器计数死亡或活细胞。然而,细胞染色步骤相对耗时,并且染色是有毒的。染色后细胞的内部结构被破坏,导致有价值的细胞不能再使用。在这项工作中,我们提出了一种基于二维t细胞亮场图像和深度学习的无标记细胞检测算法。当使用时,这种方法消除了对细胞染色操作的需要,并且细胞活力是直接从检测亮场细胞图像确定的。基于YOLOX深度学习分析的方法对t细胞的亮场图像具有优异的检测性能,该框架在细胞检测后的mAP (mean average precision)达到96.31%以上。实验结果表明,将二维细胞亮场图像与深度神经网络相结合,可以得到一种新的无标记细胞分析方法。