Modeling of Amorphous-Carbon Cells for Molecular Dynamics Simulations

Claudia N. Sánchez, J. Domínguez-Soberanes, J. Ortiz‐Medina
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Abstract

The modeling of starting molecular structures before their analysis through computational methods is usually a critical step for their properties determination. In the case of amorphous carbon (a-C) simulations, including molecular dynamics (MD) or first principles (ab-initio) routines, the proportion between sp, sp2 and sp3 carbon hybridization are fundamental parameters, with direct implications on the electronic and structural properties of the materials under analysis. In this paper, a method for controlling the fraction of sp2- hybridized carbon within a-C structures is proposed, by means of an algorithm that generates a-C cells appropriate as staring structures for most of the MD and ab-initio simulation packages.
非晶碳细胞的分子动力学模拟
在通过计算方法进行分析之前,对初始分子结构进行建模通常是确定其性质的关键步骤。在非晶碳(a-C)模拟的情况下,包括分子动力学(MD)或第一性原理(ab-initio)程序,sp, sp2和sp3碳杂化之间的比例是基本参数,直接影响所分析材料的电子和结构性质。本文提出了一种控制a- c结构中sp2-杂化碳的比例的方法,该方法通过一种算法生成适合于大多数MD和ab-initio模拟包的起始结构的a- c细胞。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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