Claudia N. Sánchez, J. Domínguez-Soberanes, J. Ortiz‐Medina
{"title":"Modeling of Amorphous-Carbon Cells for Molecular Dynamics Simulations","authors":"Claudia N. Sánchez, J. Domínguez-Soberanes, J. Ortiz‐Medina","doi":"10.1109/CONCAPANXXXIX47272.2019.8977068","DOIUrl":null,"url":null,"abstract":"The modeling of starting molecular structures before their analysis through computational methods is usually a critical step for their properties determination. In the case of amorphous carbon (a-C) simulations, including molecular dynamics (MD) or first principles (ab-initio) routines, the proportion between sp, sp2 and sp3 carbon hybridization are fundamental parameters, with direct implications on the electronic and structural properties of the materials under analysis. In this paper, a method for controlling the fraction of sp2- hybridized carbon within a-C structures is proposed, by means of an algorithm that generates a-C cells appropriate as staring structures for most of the MD and ab-initio simulation packages.","PeriodicalId":272652,"journal":{"name":"2019 IEEE 39th Central America and Panama Convention (CONCAPAN XXXIX)","volume":"9 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2019-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"2019 IEEE 39th Central America and Panama Convention (CONCAPAN XXXIX)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/CONCAPANXXXIX47272.2019.8977068","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
The modeling of starting molecular structures before their analysis through computational methods is usually a critical step for their properties determination. In the case of amorphous carbon (a-C) simulations, including molecular dynamics (MD) or first principles (ab-initio) routines, the proportion between sp, sp2 and sp3 carbon hybridization are fundamental parameters, with direct implications on the electronic and structural properties of the materials under analysis. In this paper, a method for controlling the fraction of sp2- hybridized carbon within a-C structures is proposed, by means of an algorithm that generates a-C cells appropriate as staring structures for most of the MD and ab-initio simulation packages.