Effect of single amino acid mutations on C-terminal domain of breast cancer susceptible protein 1

Satish Kumar, Lingaraja Jena, Maheswata Sahoo, Kanchan Mohod, S. Daf, A. Varma
{"title":"Effect of single amino acid mutations on C-terminal domain of breast cancer susceptible protein 1","authors":"Satish Kumar, Lingaraja Jena, Maheswata Sahoo, Kanchan Mohod, S. Daf, A. Varma","doi":"10.1504/ijbra.2019.10025475","DOIUrl":null,"url":null,"abstract":"The most commonly diagnosed cancer in women is the breast cancer. Around 5-10% of breast cancer cases are hereditary, mainly due to the mutation in the breast cancer susceptible Breast Cancer 1 (BRCA1) and Breast Cancer 2 (BRCA2) tumour-suppressor genes. More than hundreds mutations are documented in BRCA1 C-terminal region (BRCT), mainly associated with repairing DNA damage and cell cycle control. In this study, we employed different mutation analysis system such as sorting intolerant from tolerant, MutPred, PON-P2, Meta-SNP, etc., to predict the pathological effects of 95 distinct miss sense mutation on BRCT domain. Out of which, 37 mutations were predicted to be deleterious by all mutation analysis systems affecting the protein stability and its normal function leading to causing cancer. The computational approach for finding out the impact of mutation on BRCA protein may provide a way in early detection and therapy in breast cancer patients.","PeriodicalId":434900,"journal":{"name":"Int. J. Bioinform. Res. Appl.","volume":"22 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2019-11-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"4","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Int. J. Bioinform. Res. Appl.","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1504/ijbra.2019.10025475","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 4

Abstract

The most commonly diagnosed cancer in women is the breast cancer. Around 5-10% of breast cancer cases are hereditary, mainly due to the mutation in the breast cancer susceptible Breast Cancer 1 (BRCA1) and Breast Cancer 2 (BRCA2) tumour-suppressor genes. More than hundreds mutations are documented in BRCA1 C-terminal region (BRCT), mainly associated with repairing DNA damage and cell cycle control. In this study, we employed different mutation analysis system such as sorting intolerant from tolerant, MutPred, PON-P2, Meta-SNP, etc., to predict the pathological effects of 95 distinct miss sense mutation on BRCT domain. Out of which, 37 mutations were predicted to be deleterious by all mutation analysis systems affecting the protein stability and its normal function leading to causing cancer. The computational approach for finding out the impact of mutation on BRCA protein may provide a way in early detection and therapy in breast cancer patients.
单氨基酸突变对乳腺癌易感蛋白c末端结构域的影响
女性中最常见的癌症是乳腺癌。大约5-10%的乳腺癌病例是遗传性的,主要是由于乳腺癌易感的乳腺癌1 (BRCA1)和乳腺癌2 (BRCA2)肿瘤抑制基因的突变。在BRCA1 c -末端区(BRCT)记录了数百个突变,主要与修复DNA损伤和细胞周期控制有关。在本研究中,我们采用了不同的突变分析系统,如从耐受性、MutPred、PON-P2、Meta-SNP等进行分类,预测了95种不同的缺失感突变在BRCT结构域上的病理作用。所有突变分析系统预测其中37个突变是有害的,影响蛋白质的稳定性和正常功能,导致癌症。研究突变对BRCA蛋白影响的计算方法可能为乳腺癌患者的早期发现和治疗提供一种方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信