{"title":"Mapping Whole DNA Sequence on Variant Maps","authors":"Yuyuan Mao, Jeffrey Zheng, Wenjia Liu","doi":"10.1145/3110025.3110140","DOIUrl":null,"url":null,"abstract":"Whole DNA sequence is naturally related to big data streams, it is a challenge task to make a classification and visualization for whole DNA sequences. In this paper, a new mapping method for whole DNA sequence is proposed, and a special mapping scheme is used to transfer a whole DNA sequence as multiple 2D statistical probability maps. A sample case is selected from a night monkey species from south America (Aotus Nancymaae), interesting patterns are observed from relevant maps.","PeriodicalId":399660,"journal":{"name":"Proceedings of the 2017 IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining 2017","volume":"57 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2017-07-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"6","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Proceedings of the 2017 IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining 2017","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1145/3110025.3110140","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 6
Abstract
Whole DNA sequence is naturally related to big data streams, it is a challenge task to make a classification and visualization for whole DNA sequences. In this paper, a new mapping method for whole DNA sequence is proposed, and a special mapping scheme is used to transfer a whole DNA sequence as multiple 2D statistical probability maps. A sample case is selected from a night monkey species from south America (Aotus Nancymaae), interesting patterns are observed from relevant maps.