M. Lynnyk, I. Liskina, І.А. Kalabukha, V. Ignatieva, O. Tarasenko
{"title":"Possibilities of radiomics in processing data of CT scan of the chest organs in diagnosis of pulmonary tuberculosis","authors":"M. Lynnyk, I. Liskina, І.А. Kalabukha, V. Ignatieva, O. Tarasenko","doi":"10.30978/tb-2022-2-36","DOIUrl":null,"url":null,"abstract":"The article shows the possibility of applying radiomics in the processing of chest CT data in the diagnosis of pulmonary tuberculosis. Currently, a subjective method based on the knowledge and experience of a radiologist is used to process CT images. A new approach to CT image analysis can fundamentally change the diagnostic process. Its essence is to create mathematical models and computer algorithms that take medical images as input and produce pathophysiological features of tissues.Dragonfly software, provided free of charge by OBYECT RESERCH SYSTEMS (ORS), Montreal, Canada, is used for CT slice analysis, which enables segmentation, mathematical and statistical processing of images, construction of ordinary and segmented histograms. To work with the program, dicom - CT files are transformed into raster files (Tiff, Jpeg, Raw) and further analysis of CT slices is performed by grayscale gradations (behind image pixels, not behind dicom file voxels). It should be emphasized that the grayscale analysis correlates with the Hounsfield units.It has been shown that based on the data of pathomorphological examination of the affected tissue, it is impossible to determine the difference between chemoresistant and susceptible pulmonary tuberculosis.Processing of CT data with the construction of conventional and segmental histograms using Dragonfly software tools makes it possible to identify pathophysiological features of tissues in the diagnosis of sensitive and chemoresistant pulmonary tuberculosis. Further research is needed to identify patterns and differences in the determination of densities in the diagnosis of sensitive and chemoresistant pulmonary tuberculosis.","PeriodicalId":292478,"journal":{"name":"Tuberculosis, Lung Diseases, HIV Infection","volume":"1 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2022-06-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Tuberculosis, Lung Diseases, HIV Infection","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.30978/tb-2022-2-36","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
The article shows the possibility of applying radiomics in the processing of chest CT data in the diagnosis of pulmonary tuberculosis. Currently, a subjective method based on the knowledge and experience of a radiologist is used to process CT images. A new approach to CT image analysis can fundamentally change the diagnostic process. Its essence is to create mathematical models and computer algorithms that take medical images as input and produce pathophysiological features of tissues.Dragonfly software, provided free of charge by OBYECT RESERCH SYSTEMS (ORS), Montreal, Canada, is used for CT slice analysis, which enables segmentation, mathematical and statistical processing of images, construction of ordinary and segmented histograms. To work with the program, dicom - CT files are transformed into raster files (Tiff, Jpeg, Raw) and further analysis of CT slices is performed by grayscale gradations (behind image pixels, not behind dicom file voxels). It should be emphasized that the grayscale analysis correlates with the Hounsfield units.It has been shown that based on the data of pathomorphological examination of the affected tissue, it is impossible to determine the difference between chemoresistant and susceptible pulmonary tuberculosis.Processing of CT data with the construction of conventional and segmental histograms using Dragonfly software tools makes it possible to identify pathophysiological features of tissues in the diagnosis of sensitive and chemoresistant pulmonary tuberculosis. Further research is needed to identify patterns and differences in the determination of densities in the diagnosis of sensitive and chemoresistant pulmonary tuberculosis.
本文论述了放射组学在胸部CT数据处理中应用于肺结核诊断的可能性。目前,基于放射科医生的知识和经验的主观方法被用于处理CT图像。一种新的CT图像分析方法可以从根本上改变诊断过程。其本质是建立数学模型和计算机算法,以医学图像为输入,产生组织的病理生理特征。使用加拿大蒙特利尔的object research SYSTEMS (ORS)公司免费提供的Dragonfly软件进行CT切片分析,可以对图像进行分割、数学和统计处理,构建普通直方图和分割直方图。为了配合该程序,dicom - CT文件被转换为光栅文件(Tiff, Jpeg, Raw),并通过灰度渐变(图像像素后面,而不是dicom文件体素后面)对CT切片进行进一步分析。应该强调的是,灰度分析与霍斯菲尔德单位相关。已有研究表明,仅凭病变组织的病理形态学检查数据,无法确定耐药肺结核与易感肺结核的区别。利用Dragonfly软件工具对CT数据进行处理,构建常规直方图和分段直方图,可以识别组织的病理生理特征,用于诊断敏感性和耐药性肺结核。需要进一步的研究来确定敏感性和耐药肺结核诊断中密度测定的模式和差异。