Kamonchat Apivanichkul, P. Phasukkit, P. Dankulchai
{"title":"Performance Comparison of Deep Learning Approach for Automatic CT Image Segmentation by Using Window Leveling","authors":"Kamonchat Apivanichkul, P. Phasukkit, P. Dankulchai","doi":"10.1109/BMEiCON53485.2021.9745252","DOIUrl":null,"url":null,"abstract":"In tumor radiotherapy process, radiologist need to make multipleorgans contouring on medical images such as CT scans for computing appropriate dose and making a suitable treatment plan for patients. This is a necessary step before treatment. This paper was written to be one of automatic image segmentation research by using deep learning. The experiment compared performance between preprocessing input datasets with custom window leveling normalization and following by organ types. We chose the bladder, the rectum and the femur as target organs in this paper. Datasets are directly obtained from Siriraj Hospital that contoured by radiologists. There are 10 datasets of each organs. We used U-Net as main structure to extract features on image then evaluated by dice similarity coefficient (DSC) and intersection over union (IoU). The experiment resulted that training with custom window leveling normalization is better performance. The bladder got DSC and IoU of 78.34% and 70.46%, femur were 39.71% and 28.03%, and rectum were 19.19% and 12.20%, respectively.","PeriodicalId":380002,"journal":{"name":"2021 13th Biomedical Engineering International Conference (BMEiCON)","volume":"53 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2021-11-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"2","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"2021 13th Biomedical Engineering International Conference (BMEiCON)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/BMEiCON53485.2021.9745252","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 2
Abstract
In tumor radiotherapy process, radiologist need to make multipleorgans contouring on medical images such as CT scans for computing appropriate dose and making a suitable treatment plan for patients. This is a necessary step before treatment. This paper was written to be one of automatic image segmentation research by using deep learning. The experiment compared performance between preprocessing input datasets with custom window leveling normalization and following by organ types. We chose the bladder, the rectum and the femur as target organs in this paper. Datasets are directly obtained from Siriraj Hospital that contoured by radiologists. There are 10 datasets of each organs. We used U-Net as main structure to extract features on image then evaluated by dice similarity coefficient (DSC) and intersection over union (IoU). The experiment resulted that training with custom window leveling normalization is better performance. The bladder got DSC and IoU of 78.34% and 70.46%, femur were 39.71% and 28.03%, and rectum were 19.19% and 12.20%, respectively.
在肿瘤放疗过程中,放射科医生需要对CT扫描等医学图像进行多器官轮廓,计算合适的剂量,为患者制定合适的治疗方案。这是治疗前的必要步骤。本文是基于深度学习的图像自动分割研究之一。实验比较了自定义窗口流平归一化预处理输入数据集和器官类型预处理输入数据集的性能。我们选择膀胱、直肠和股骨作为靶器官。数据集直接从Siriraj医院获得,由放射科医生绘制轮廓。每个器官有10个数据集。我们以U-Net为主要结构提取图像特征,然后用dice similarity coefficient (DSC)和intersection over union (IoU)对图像进行评价。实验结果表明,自定义窗口流平归一化训练具有更好的性能。膀胱DSC和IoU分别为78.34%和70.46%,股骨为39.71%和28.03%,直肠为19.19%和12.20%。