Two way clustering of microarray data using a hybrid approach

R. Malutan, B. Belean, P. G. Vilda, M. Borda
{"title":"Two way clustering of microarray data using a hybrid approach","authors":"R. Malutan, B. Belean, P. G. Vilda, M. Borda","doi":"10.1109/TSP.2011.6043698","DOIUrl":null,"url":null,"abstract":"The Microarray technique is rather powerful, as it allows to test up thousands of genes at a time, but this produces an overwhelming set of data files containing huge amounts of data, which is quite difficult to pre-process, separate, classify and correlate for interesting conclusions to be extracted. Modern machine learning, data mining and clustering techniques based on information theory, are needed to read and interpret the information contents buried in those large data sets. Independent Component Analysis method can be used to correct the data affected by corruption processes or to filter the uncorrectable one and then clustering methods can group similar genes or classify samples. In this paper a hybrid approach is used to obtain a two way unsupervised clustering for a corrected microarray data.","PeriodicalId":341695,"journal":{"name":"2011 34th International Conference on Telecommunications and Signal Processing (TSP)","volume":"63 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2011-10-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"3","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"2011 34th International Conference on Telecommunications and Signal Processing (TSP)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/TSP.2011.6043698","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 3

Abstract

The Microarray technique is rather powerful, as it allows to test up thousands of genes at a time, but this produces an overwhelming set of data files containing huge amounts of data, which is quite difficult to pre-process, separate, classify and correlate for interesting conclusions to be extracted. Modern machine learning, data mining and clustering techniques based on information theory, are needed to read and interpret the information contents buried in those large data sets. Independent Component Analysis method can be used to correct the data affected by corruption processes or to filter the uncorrectable one and then clustering methods can group similar genes or classify samples. In this paper a hybrid approach is used to obtain a two way unsupervised clustering for a corrected microarray data.
使用混合方法的微阵列数据的双向聚类
微阵列技术相当强大,因为它允许一次测试数千个基因,但这产生了一组压倒性的数据文件,其中包含大量数据,很难预处理,分离,分类和关联,以提取有趣的结论。需要基于信息论的现代机器学习、数据挖掘和聚类技术来读取和解释隐藏在这些大数据集中的信息内容。独立成分分析方法可用于校正受损坏过程影响的数据或过滤不正确的数据,然后聚类方法可对相似基因进行分组或对样本进行分类。本文采用一种混合方法对修正后的微阵列数据进行双向无监督聚类。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信