High-throughput Single-strand Conformation Polymorphism Analysis of an LPL Gene Mutation by Temperature-controlled On-chip Capillary Electrophoresis

K. Ono, M. Koike, T. Ohse, A. Takagi, Y. Ikeda
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Abstract

Temperature-controlled on-chip capillary electrophoresis (CE) was applied to multi-temperature single-strand conformation polymorphism (SSCP) analysis for the detection of three lipoprotein lipase (LPL) gene mutations. In the SSCP analysis, five different temperature conditions (10, 15, 20, 25, and 30degC) were used to obtain an SSCP pattern. Differences between the electropherograms of Cy5-labeled PCR products of wild/wild homozygote and wild/mutant heterozygote were clearly detected for all four LPL mutations in at least one appropriate temperature condition. These results indicate that our SSCP system is applicable to high-throughput and accurate SSCP screening for locating unknown as well as known single nucleotide polymorphisms (SNPs)
一个LPL基因突变的高通量单链构象多态性分析
采用控温芯片毛细管电泳(CE)进行多温度单链构象多态性(SSCP)分析,检测3个脂蛋白脂肪酶(LPL)基因突变。在SSCP分析中,使用5种不同的温度条件(10、15、20、25和30℃)来获得SSCP模式。在至少一个合适的温度条件下,可以清楚地检测到所有四种LPL突变的野生/野生纯合子和野生/突变杂合子的cy5标记PCR产物的电泳差异。这些结果表明,我们的SSCP系统适用于高通量和准确的SSCP筛选,以定位未知和已知的单核苷酸多态性(snp)。
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