Arachne: An Arkouda Package for Large-Scale Graph Analytics

Oliver Alvarado Rodriguez, Zhihui Du, J. Patchett, Fuhuan Li, David A. Bader
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引用次数: 5

Abstract

Due to the emergence of massive real-world graphs, whose sizes may extend to terabytes, new tools must be developed to enable data scientists to handle such graphs efficiently. These graphs may include social networks, computer networks, and genomes. In this paper, we propose a novel graph package Arachne to make large-scale graph analytics more effortless and more efficient based on the open-source Arkouda framework, which has been developed to allow users to perform massively parallel computations on distributed data with an interface similar to NumPy. In this package, we developed a fundamental sparse graph data structure and several useful graph algorithms around our data structure to build a basic algorithmic library. Benchmarks and tools have also been developed to evaluate and demonstrate the provided graph algorithms. The graph algorithms we have implemented thus far include breadth-first search (BFS), connected components (CC), k-Truss (KT), Jaccard coefficients (JC), triangle counting (TC), and triangle centrality (TCE). Their corresponding experimental results based on realworld and synthetic graphs are presented. Arachne is organized as an Arkouda extension package and is publicly available on GitHub (https://github.com/Bears-R-Us/arkouda-njit).
Arachne:用于大规模图分析的Arkouda软件包
由于大量真实世界图形的出现,其大小可能扩展到tb,因此必须开发新的工具以使数据科学家能够有效地处理此类图形。这些图可能包括社会网络、计算机网络和基因组。在本文中,我们提出了一个新的图形包Arachne,基于开源的Arkouda框架,使大规模图形分析更加轻松和高效,该框架已经开发出来,允许用户使用类似于NumPy的接口对分布式数据执行大规模并行计算。在这个包中,我们开发了一个基本的稀疏图数据结构和几个有用的图算法,围绕我们的数据结构构建了一个基本的算法库。还开发了基准和工具来评估和演示所提供的图算法。到目前为止,我们已经实现的图算法包括广度优先搜索(BFS)、连接组件(CC)、k-Truss (KT)、Jaccard系数(JC)、三角形计数(TC)和三角形中心性(TCE)。给出了基于真实世界和合成图的相应实验结果。Arachne被组织为Arkouda扩展包,并在GitHub (https://github.com/Bears-R-Us/arkouda-njit)上公开提供。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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