CRIS — Computational research infrastructure for science

Eduard Constantin Dragut, Peter Baker, Jia Xu, M. Sarfraz, E. Bertino, Amgad Madkour, Raghu Agarwal, Ahmed R. Mahmood, Sangchun Han
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引用次数: 5

Abstract

The challenges facing the scientific community are common and real: conduct relevant and verifiable research in a rapidly changing collaborative landscape with an ever increasing scale of data. It has come to a point where research activities cannot scale at the rate required without improved cyberinfrastructure (CI). In this paper we describe CRIS (The Computational Research Infrastructure for Science), with its primary tenets to provide an easy to use, scalable, and collaborative scientific data management and workflow cyberinfrastructure for scientists lacking extensive computational expertise. Some of the key features of CRIS are: 1) semantic definition of scientific data using domain vocabularies; 2) embedded provenance for all levels of research activity (data, workflows, tools etc.); 3) easy integration of existing heterogeneous data and computational tools on local or remote computers; 4) automatic data quality monitoring for syntactic and domain standards; and 5) shareable yet secure access to research data, computational tools and equipment. CRIS currently has a community of users in Agronomy, Biochemistry, Bioinformatics and Healthcare Engineering at Purdue University (cris.cyber.purdue.edu).
CRIS -科学计算研究基础设施
科学界面临的挑战是共同和真实的:在数据规模不断增加的快速变化的合作环境中进行相关和可验证的研究。如果没有改进的网络基础设施(CI),研究活动就无法以所需的速度扩展。在本文中,我们描述了CRIS(科学计算研究基础设施),其主要宗旨是为缺乏广泛计算专业知识的科学家提供易于使用,可扩展和协作的科学数据管理和工作流网络基础设施。CRIS的主要特点是:1)利用领域词汇对科学数据进行语义定义;2)各级研究活动(数据、工作流程、工具等)的嵌入式来源;3)易于集成本地或远程计算机上现有的异构数据和计算工具;4)句法和领域标准的自动数据质量监控;5)对研究数据、计算工具和设备的共享和安全访问。CRIS目前在普渡大学的农学、生物化学、生物信息学和医疗保健工程领域拥有一个用户社区(cris.cyber.purdue.edu)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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