Label-free biomarker information by high-throughput holographic microscopy to support detection of cancer and neglected tropical diseases (Conference Presentation)

Matthias Ugele, C. Klenk, D. Heim, S. Röhrl, Frea Mehta, Nermina Vejzagic, K. Peschke, K. Diepold, C. Costa, M. Reichert, M. Meissner, K. Götze, O. Hayden
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引用次数: 0

Abstract

Manual blood smear analysis remains the gold standard to diagnose hematological disorders and infections of blood parasites. However, the analysis and interpretation of peripheral blood smears requires expert users, is time consuming, depends on inter-observer variation, and is not compatible with a high-throughput workflow for clinical routine diagnostics (Dunning & Safo, Biotech. Histochem. 2011, 86, 69–75; Pierre, Clin. Lab. Med., 2002, 22, 279–297). Instead, automated hematology analyzers only flag atypical results which provides no clear classification of diseases and require extensive sample preparation. Label-free image analysis of untouched blood cells would reduce pre-analytical efforts and potentially allows characterization of samples with higher information content compared to both smear analysis and conventional automated flow cytometry, as the blood cell morphology is preserved. Furthermore, preclinical research work is in need for non-invasive analysis of e.g. cancer cells or infected cells to support the discovery of new drugs. We suggest to apply high-throughput and label-free workflows based on digital holographic microscopy for standardizable image analysis relevant for pre- and clinical diagnosis. In the case of parasitic infections, the label-free detection and analysis of malaria parasites has been addressed by various studies (Anand et al., IEEE Photonics J., 2012, 4, 1456-1464; Seo et al., Appl. Phys. Lett., 2014, 104, 1-4; Park et al, PloS One, 2016, 11, 1-19; Ugele et al., Lab Chip, 2018, 18, 1704-1712). The detection of neglected tropical diseases affecting livestock and humans, such as Chagas disease and Leishmaniosis, has not been addressed so far by the community. Our platform technology is based on a customized differential holographic microscopy setup, which has been previously described (Ugele et al., Lab Chip, 2018, 18, 1704-1712; Ugele et al., Adv. Sci., 2018, 5, 1800761). Reference data sets of clinical leukemic samples, cancer cell cultures in solution, and in vitro cultures of various parasites were collected to understand the translational potential for this methodology. Hydrodynamic and viscoelastic focusing in a microfluidics channel was used for high-throughput imaging and enrichment/depletion of cell populations without the need for any autofocusing procedures. Morphological parameters describing the inner consistency were calculated from segmented phase images of the cells/parasites and combined with machine learning algorithms for improved analysis by the discovery of label-free biomarkers. In this way, improved subtyping of acute and chronic leukemias, myeloproliferative neoplasms, and further hematological disorders was achieved. Second, a detection of Trypanosoma and Leishmania parasites could be shown and in vitro cultures of Schistosomia mansoni were classified according to different viability stages. Third, the capability of anti-cancer drug candidate screening was demonstrated by monitoring the mesenchymal-epithelial transition of pancreas cancer cell cultures. We envision, that our platform technology has the potential as a cost-efficient method for automated diagnosis of various hematological disorders, parasitic infections, drug screening and monitoring of therapy efficacy. With further integration effort we also believe that the technology can be applied in resource limited settings.
利用高通量全息显微镜获得无标记生物标志物信息以支持癌症和被忽视的热带病的检测(会议报告)
手工血液涂片分析仍然是诊断血液疾病和血液寄生虫感染的金标准。然而,外周血涂片的分析和解释需要专家用户,耗时,取决于观察者之间的差异,并且与临床常规诊断的高通量工作流程不兼容(Dunning & Safo, Biotech)。组织化学,2011,86,69-75;皮埃尔,中国。实验室。医学杂志,2002,22,279-297)。相反,自动化血液学分析仪只标记非典型结果,不提供明确的疾病分类,需要大量的样品制备。未接触血细胞的无标签图像分析将减少分析前的工作量,并且与涂片分析和传统的自动流式细胞术相比,由于血细胞形态被保留,因此可能允许具有更高信息含量的样品表征。此外,临床前研究工作需要对癌细胞或感染细胞进行无创分析,以支持新药的发现。我们建议应用基于数字全息显微镜的高通量和无标签工作流程,用于标准化的图像分析,与前期和临床诊断相关。在寄生虫感染的情况下,各种研究已经解决了疟疾寄生虫的无标签检测和分析(Anand et al., IEEE Photonics J., 2012, 4,1456 -1464;Seo等人,苹果。理论物理。列托人。学报,2014,104 (1):1-4;Park et al ., PloS One, 2016, 11, 1-19;Ugele等,实验室芯片,2018,18(1704-1712)。迄今为止,社区尚未处理发现影响牲畜和人类的被忽视的热带病,如恰加斯病和利什曼病。我们的平台技术基于定制的差分全息显微镜设置,该设置之前已经描述过(Ugele等人,Lab Chip, 2018,18, 1704-1712;Ugele et al.,广告科学。浙江农业学报,2018,5,1800761)。收集了临床白血病样本、溶液中癌细胞培养和各种寄生虫体外培养的参考数据集,以了解该方法的转化潜力。微流体通道中的流体动力和粘弹性聚焦用于高通量成像和细胞群的富集/耗尽,而无需任何自动聚焦程序。描述内部一致性的形态学参数从细胞/寄生虫的分割相位图像中计算,并结合机器学习算法,通过发现无标记生物标志物来改进分析。通过这种方式,改善了急性和慢性白血病、骨髓增生性肿瘤和进一步的血液系统疾病的分型。第二,检测到锥虫和利什曼原虫,并根据不同的生存期对曼氏血吸虫体外培养物进行了分类。第三,通过监测胰腺癌细胞培养物的间充质-上皮转化,证明了抗癌候选药物筛选的能力。我们设想,我们的平台技术有潜力成为一种具有成本效益的方法,用于各种血液病、寄生虫感染、药物筛选和治疗效果监测的自动诊断。通过进一步的整合工作,我们还相信该技术可以应用于资源有限的环境。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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