Bronchial Light Microscopy Image Segmentation Based on Boundary Attention
Kuncheng Li, Zhexin Li, Yicheng Liu, Qinzhi Fang, Bangwangke Tang, Liping Huang, Xinyu Xiong
{"title":"Bronchial Light Microscopy Image Segmentation Based on Boundary Attention","authors":"Kuncheng Li, Zhexin Li, Yicheng Liu, Qinzhi Fang, Bangwangke Tang, Liping Huang, Xinyu Xiong","doi":"10.1145/3483845.3483890","DOIUrl":null,"url":null,"abstract":"∗The identification of bronchus is of great significance in assisting the diagnosis of lung diseases. However, identifying the bronchus from tissue light microscopy images is a heavily repetitive task that requires a lot of time and effort. Most of the mainstream segmentation methods pay attention to the overall accuracy of the region, without special consideration for the boundaries. However, bronchi often have flexible shapes, which poses a challenge for accurate segmentation, especially for details at the edges. Therefore, this paper proposes a boundary-attention based bronchi segmentation network. This network is a “predict and refine” architecture. Specifically, a coarse segmentation result is first generated by the prediction network, and then the edge segmentation quality is improved by the refinement network. In addition, by specially designed hybrid loss, our network can focus on patch-level contextual information as well as pixel-level accuracy. At the same time, the global attention module and the local attention module enable our network to extract both multiscale features and focus on error-prone regions. Through our network, not only fine segmentation results can be achieved, but also superior performance at the bronchial boundary. Experiments on the BronSeg dataset show that our method outperforms mainstream methods in all metrics, especially in mIOU, which reaches 88.41%. ∗Corresponding author. Permission to make digital or hard copies of all or part of this work for personal or classroom use is granted without fee provided that copies are not made or distributed for profit or commercial advantage and that copies bear this notice and the full citation on the first page. Copyrights for components of this work owned by others than ACM must be honored. Abstracting with credit is permitted. To copy otherwise, or republish, to post on servers or to redistribute to lists, requires prior specific permission and/or a fee. Request permissions from permissions@acm.org. CCRIS’21, August 20–22, 2021, Qingdao, China © 2021 Association for Computing Machinery. ACM ISBN 978-1-4503-9045-3/21/08. . . $15.00 https://doi.org/10.1145/3483845.3483890 CCS CONCEPTS • Artificial intelligence; • Computer vision; • Image segmentation;","PeriodicalId":134636,"journal":{"name":"Proceedings of the 2021 2nd International Conference on Control, Robotics and Intelligent System","volume":"25 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2021-08-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Proceedings of the 2021 2nd International Conference on Control, Robotics and Intelligent System","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1145/3483845.3483890","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
∗The identification of bronchus is of great significance in assisting the diagnosis of lung diseases. However, identifying the bronchus from tissue light microscopy images is a heavily repetitive task that requires a lot of time and effort. Most of the mainstream segmentation methods pay attention to the overall accuracy of the region, without special consideration for the boundaries. However, bronchi often have flexible shapes, which poses a challenge for accurate segmentation, especially for details at the edges. Therefore, this paper proposes a boundary-attention based bronchi segmentation network. This network is a “predict and refine” architecture. Specifically, a coarse segmentation result is first generated by the prediction network, and then the edge segmentation quality is improved by the refinement network. In addition, by specially designed hybrid loss, our network can focus on patch-level contextual information as well as pixel-level accuracy. At the same time, the global attention module and the local attention module enable our network to extract both multiscale features and focus on error-prone regions. Through our network, not only fine segmentation results can be achieved, but also superior performance at the bronchial boundary. Experiments on the BronSeg dataset show that our method outperforms mainstream methods in all metrics, especially in mIOU, which reaches 88.41%. ∗Corresponding author. Permission to make digital or hard copies of all or part of this work for personal or classroom use is granted without fee provided that copies are not made or distributed for profit or commercial advantage and that copies bear this notice and the full citation on the first page. Copyrights for components of this work owned by others than ACM must be honored. Abstracting with credit is permitted. To copy otherwise, or republish, to post on servers or to redistribute to lists, requires prior specific permission and/or a fee. Request permissions from permissions@acm.org. CCRIS’21, August 20–22, 2021, Qingdao, China © 2021 Association for Computing Machinery. ACM ISBN 978-1-4503-9045-3/21/08. . . $15.00 https://doi.org/10.1145/3483845.3483890 CCS CONCEPTS • Artificial intelligence; • Computer vision; • Image segmentation;
基于边界关注的支气管光学显微镜图像分割
*支气管的鉴别对于协助肺部疾病的诊断有重要的意义。然而,从组织光学显微镜图像中识别支气管是一项非常重复的任务,需要大量的时间和精力。主流的分割方法大多关注区域的整体精度,而没有特别考虑区域的边界。然而,支气管通常具有灵活的形状,这对准确分割提出了挑战,特别是对边缘的细节。为此,本文提出了一种基于边界注意的支气管分割网络。这个网络是一个“预测和改进”的架构。具体而言,首先由预测网络生成粗分割结果,然后通过细化网络提高边缘分割质量。此外,通过特殊设计的混合损失,我们的网络可以专注于补丁级上下文信息和像素级精度。同时,全局关注模块和局部关注模块使我们的网络既可以提取多尺度特征,又可以关注容易出错的区域。通过我们的网络,不仅可以获得良好的分割效果,而且在支气管边界处表现优异。在BronSeg数据集上的实验表明,我们的方法在所有指标上都优于主流方法,特别是在mIOU上达到了88.41%。∗通讯作者。允许免费制作本作品的全部或部分数字或硬拷贝供个人或课堂使用,前提是副本不是为了盈利或商业利益而制作或分发的,并且副本在第一页上带有本通知和完整的引用。本作品组件的版权归ACM以外的其他人所有,必须得到尊重。允许有信用的摘要。以其他方式复制或重新发布,在服务器上发布或重新分发到列表,需要事先获得特定许可和/或付费。从permissions@acm.org请求权限。CCRIS ' 21, 2021年8月20-22日,中国青岛©2021计算机械协会。Acm isbn 978-1-4503-9045-3/21/08…$15.00 https://doi.org/10.1145/3483845.3483890 CCS CONCEPTS•人工智能;•计算机视觉;•图像分割;
本文章由计算机程序翻译,如有差异,请以英文原文为准。