Identification of lung cancer associated protein by clique percolation clustering analysis

Nilubon Kurubanjerdjit, Chien-Hung Huang, K. Ng
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引用次数: 1

Abstract

Identification of cancer associated proteins is the crucial problem in cancer research. Recently various techniques have been developed to discover novel cancer genes/proteins. Topological network of protein-protein interaction with their gene ontology annotation are good predictors of cancer proteins. Protein-protein interaction information has provided a basis for studying the cancer cellular network. In this study, we implemented clique percolation clustering approach on lung cancer protein-protein interaction information to identify cancer associated proteins, the enriched protein biological function in molecular networks of the clique motif and also the enriched KEGG pathways were observed.
肺癌相关蛋白的团渗聚类分析
癌症相关蛋白的鉴定是癌症研究中的关键问题。最近发展了各种各样的技术来发现新的癌症基因/蛋白质。蛋白质相互作用的拓扑网络及其基因本体注释是癌症蛋白的良好预测指标。蛋白质-蛋白质相互作用信息为研究癌细胞网络提供了基础。在本研究中,我们对肺癌蛋白-蛋白相互作用信息采用团簇渗透聚类方法来鉴定癌症相关蛋白,并观察了团簇基序分子网络中富集蛋白的生物学功能以及富集的KEGG通路。
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