In-situ visualization for global hybrid simulations

H. Karimabadi, B. Loring, P. O’leary, A. Majumdar, M. Tatineni, Berk Geveci
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引用次数: 16

Abstract

Petascale simulations have become mission critical in diverse areas of science and engineering. Knowledge discovery from such simulations remains a major challenge and is becoming more urgent as the march towards ultra-scale computing with millions of cores continues. One major issue with the current paradigm of running the simulations and saving the data to disk for post-processing is that it is only feasible to save the data at a small number of time slices. This low temporal resolution of the saved data is a serious handicap in many studies where the time evolution of the system is of principle interest. One way to address this I/O issue is through in-situ visualization strategies. The idea is to minimize data storage by extracting important features of the data and saving them, rather than raw data, at high temporal resolution. Parallel file systems of current petascale and future exascale systems are expensive shared resources and need to be utilized effectively, and similarly archival storage can be limited and both of these will benefit from in-situ visualization as it will lead to intelligent way of utilizing storage. In this paper, we present preliminary results from our in-situ visualization for global hybrid (electron fluid, kinetic ions) simulations which are used to study the interaction of the solar wind with planetary magnetospheres such as the Earth and Mercury. In particular, we examine the overhead and effect on code performance associated with the inline computations associated with in-situ visualization.
全球混合模拟的现场可视化
千万亿次模拟已经成为科学和工程各个领域的关键任务。从这样的模拟中发现知识仍然是一个重大挑战,随着数百万核的超大规模计算的继续发展,这一挑战变得更加紧迫。当前运行模拟并将数据保存到磁盘以供后处理的范例的一个主要问题是,只能在少量时间片中保存数据。这种低时间分辨率的保存数据是一个严重的障碍,在许多研究中,系统的时间演变是主要的兴趣。解决这个I/O问题的一种方法是通过原位可视化策略。其思想是通过提取数据的重要特征并以高时间分辨率保存它们(而不是原始数据)来最小化数据存储。当前千兆级和未来百兆级系统的并行文件系统是昂贵的共享资源,需要有效利用,同样,档案存储也可能受到限制,这两者都将受益于原位可视化,因为它将导致智能利用存储的方式。在本文中,我们介绍了我们对用于研究太阳风与行星磁层(如地球和水星)相互作用的全球混合(电子流体,动力学离子)模拟的原位可视化的初步结果。特别地,我们将检查与现场可视化相关的内联计算相关的开销和对代码性能的影响。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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