Monitoring of protected fungi species by methods of modern information technologies

T. Svetasheva
{"title":"Monitoring of protected fungi species by methods of modern information technologies","authors":"T. Svetasheva","doi":"10.18822/edgcc121833","DOIUrl":null,"url":null,"abstract":"INTRODUCTION \nThe emergence of smart Internet resources and the improvement of electronic mobile devices have proved to be very useful for performing various scientific applied tasks, for example, for documenting biological observations in nature.The most significant are open access online platforms that accumulate information about biodiversity and provide it to everyone, for example: Global Biodiversity Information Facility, The Biodiversity Heritage Library, the multifunctional network storage of biological material National Depository Bank of Live Systems\"Noah's Ark\" etc. Of particular interest are resources that combine, on the one hand, a platform for collecting scientific data on biodiversity, and, on the other hand, a means of communication between people who collect and analyze this data, including projects that are often presented as \"citizen science\", for example: Mushroom Observer [Wilson, Hollinger et al. 2006-present], iNaturalist [iNaturalist, 2022]. The most popular resource among nature lovers is iNaturalist [iNaturalist, 2022], which is based on the concept of mapping and sharing observations of biodiversity around the world.At the moment, iNaturalist cannot be considered as a good mobile tool for identifying fungi in the field as well as a reliable way to determination based on photographs with the help of experts, since in most cases many different characters (including microstructures) are needed for accurate identification, and photographs of fruit bodies are clearly insufficient.Nevertheless, the program can be successfully used for the certain tasks in the study of fungi[Filippova et al., 2022; Sheehan, 2021]. \nWHAT FUNGI RESEARCH TASKS CAN BE PERFORMED WITH THE INATURALIST PLATFORM? \n \nPhotodocumentation and mapping of finds. In general, it is suitable for any find of fungal species. However, the implementation of this task is most appropriate in the case of working with rare and well-recognized species from photographs. \nAccumulation of observations of a designated group of species in any designated area, using filters or organizing special project inside iNaturalist, for example Funga of Tula Oblast [Funga, 2021], FunDiS West Coast Rare Fungi Challenge [FunDis, 2021]. \nRevealing of new species localities through the activities of amateur naturalists, as well as by involving students, schoolchildren and their parents in posting data and discussing findings. \nOrganizing the specimen collection based on the obtained coordinates of the finds.Thanks to the data on new locations, it is easy to organize special expeditions with students or schoolchildren to \"hot spots\", or to involve amateurs to collection of specimens. \nUse as a database of finds, excursion routes, geobotanical descriptions of sample plots, as well as a kind of repository of \"voucher\" photographs \nMonitoring the appearance of fruiting bodies (phenology) of species confidently identified from photographs \n \n \nHOW CAN INATURALIST BE USED FOR MONITORING OF SPECIES INCLUDED IN THE RED DATA BOOK? WHAT INDICATORS CAN BE ASSESSED? \n \nNumber of photographic observations of rare species. \nTotal number of observed rare species. \nThe level of \"observability-recognition\" of various species in the field and at the photographs (and the possibility of monitoring). \nSpatial distribution of populations in the region. \nAbundance of fruiting bodies. \nPhenology of fruiting. \nThe ecology of the finds and the state of habitats (the latter can be assessed indirectly, by the remoteness and surroundings of collection points; for example, if the point is located deep in a hard-to-reach forest area, then there is a high probability that the population of the species will be preserved good [Aurantiporus, 2022]. \nNumber of observers, including permanent and enthusiastic ones, who can be involved in the registration of finds of protected species. \n \nFor an example of how this works, here are the results of monitoring protected species in the Tula Oblast using iNaturalist during vegetation season in 2021: 1) about 130 photographic observations of protected mushroom species were received; 2) the total number of observed species listed in the Red Data Book of the Tula Oblast [2010] is 31. Information about most of them was included in the GBIF; 3) new locations were found for 18 protected species; 4) new information about the habitats of rare species has been obtained; 5) rare species not previously recorded in the region were foundthey are candidates for the next edition of the Red Data Book (for example, Lycoperdonmammiforme Pers. [Lycoperdon, 2022], Holwayamucida (Schulzer) Korf Abawi [Holwaya, 2022]; 6) 26 observers recorded findings of rare mushroom species.Special project Red Data Book Fungi of Tula Oblast was organized based on iNaturalist-platform. \nCONCLUSION \nThe use of the iNaturalist intellectual online platform as a modern tool for studying the fungal biodiversity shows that it can help to solve a number of important tasks in the accumulation of photographic, cartographic, phenological and ecological data, as well as to attract a wide range of amateurs to learn and investigate fungi. Based on the first experience, it can be certainty said that the most significant and reliable data obtained due to monitoring of rare and protected fungal species, carried out as a part of project Red Data Book - Fungi of the Tula Oblast [2021], organized on the iNaturalist platform. During one season in 2021 preceded the release of the second edition of the Red Data Book of the Tula Oblast: lichens and fungi [2021], more than 130 photographic observations of 31 protected species of fungi were obtained, new locations were discovered for 18 species, some rare species were revealed as new for the region, new information about ecology and phenology was obtained. All data were considered in the released second edition of the Red Data Book. The results of the work continued in 2022 and also planned for the future will be taken into account in the next third edition of the book. \nTo achieve better results, it is necessary to organize a systematic approach to monitoring in iNaturalist, providing the active involvement of amateurs and biologists in photo documentation and identification of fungi finds, as well as the development of special methods for obtaining the most informative photo observations. All this, together with traditional methods of biodiversity research, will contribute to displaying an adequate picture of the distribution and occurrence of rare fungal species in the region.","PeriodicalId":336975,"journal":{"name":"Environmental Dynamics and Global Climate Change","volume":"20 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2023-01-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Environmental Dynamics and Global Climate Change","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.18822/edgcc121833","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

Abstract

INTRODUCTION The emergence of smart Internet resources and the improvement of electronic mobile devices have proved to be very useful for performing various scientific applied tasks, for example, for documenting biological observations in nature.The most significant are open access online platforms that accumulate information about biodiversity and provide it to everyone, for example: Global Biodiversity Information Facility, The Biodiversity Heritage Library, the multifunctional network storage of biological material National Depository Bank of Live Systems"Noah's Ark" etc. Of particular interest are resources that combine, on the one hand, a platform for collecting scientific data on biodiversity, and, on the other hand, a means of communication between people who collect and analyze this data, including projects that are often presented as "citizen science", for example: Mushroom Observer [Wilson, Hollinger et al. 2006-present], iNaturalist [iNaturalist, 2022]. The most popular resource among nature lovers is iNaturalist [iNaturalist, 2022], which is based on the concept of mapping and sharing observations of biodiversity around the world.At the moment, iNaturalist cannot be considered as a good mobile tool for identifying fungi in the field as well as a reliable way to determination based on photographs with the help of experts, since in most cases many different characters (including microstructures) are needed for accurate identification, and photographs of fruit bodies are clearly insufficient.Nevertheless, the program can be successfully used for the certain tasks in the study of fungi[Filippova et al., 2022; Sheehan, 2021]. WHAT FUNGI RESEARCH TASKS CAN BE PERFORMED WITH THE INATURALIST PLATFORM? Photodocumentation and mapping of finds. In general, it is suitable for any find of fungal species. However, the implementation of this task is most appropriate in the case of working with rare and well-recognized species from photographs. Accumulation of observations of a designated group of species in any designated area, using filters or organizing special project inside iNaturalist, for example Funga of Tula Oblast [Funga, 2021], FunDiS West Coast Rare Fungi Challenge [FunDis, 2021]. Revealing of new species localities through the activities of amateur naturalists, as well as by involving students, schoolchildren and their parents in posting data and discussing findings. Organizing the specimen collection based on the obtained coordinates of the finds.Thanks to the data on new locations, it is easy to organize special expeditions with students or schoolchildren to "hot spots", or to involve amateurs to collection of specimens. Use as a database of finds, excursion routes, geobotanical descriptions of sample plots, as well as a kind of repository of "voucher" photographs Monitoring the appearance of fruiting bodies (phenology) of species confidently identified from photographs HOW CAN INATURALIST BE USED FOR MONITORING OF SPECIES INCLUDED IN THE RED DATA BOOK? WHAT INDICATORS CAN BE ASSESSED? Number of photographic observations of rare species. Total number of observed rare species. The level of "observability-recognition" of various species in the field and at the photographs (and the possibility of monitoring). Spatial distribution of populations in the region. Abundance of fruiting bodies. Phenology of fruiting. The ecology of the finds and the state of habitats (the latter can be assessed indirectly, by the remoteness and surroundings of collection points; for example, if the point is located deep in a hard-to-reach forest area, then there is a high probability that the population of the species will be preserved good [Aurantiporus, 2022]. Number of observers, including permanent and enthusiastic ones, who can be involved in the registration of finds of protected species. For an example of how this works, here are the results of monitoring protected species in the Tula Oblast using iNaturalist during vegetation season in 2021: 1) about 130 photographic observations of protected mushroom species were received; 2) the total number of observed species listed in the Red Data Book of the Tula Oblast [2010] is 31. Information about most of them was included in the GBIF; 3) new locations were found for 18 protected species; 4) new information about the habitats of rare species has been obtained; 5) rare species not previously recorded in the region were foundthey are candidates for the next edition of the Red Data Book (for example, Lycoperdonmammiforme Pers. [Lycoperdon, 2022], Holwayamucida (Schulzer) Korf Abawi [Holwaya, 2022]; 6) 26 observers recorded findings of rare mushroom species.Special project Red Data Book Fungi of Tula Oblast was organized based on iNaturalist-platform. CONCLUSION The use of the iNaturalist intellectual online platform as a modern tool for studying the fungal biodiversity shows that it can help to solve a number of important tasks in the accumulation of photographic, cartographic, phenological and ecological data, as well as to attract a wide range of amateurs to learn and investigate fungi. Based on the first experience, it can be certainty said that the most significant and reliable data obtained due to monitoring of rare and protected fungal species, carried out as a part of project Red Data Book - Fungi of the Tula Oblast [2021], organized on the iNaturalist platform. During one season in 2021 preceded the release of the second edition of the Red Data Book of the Tula Oblast: lichens and fungi [2021], more than 130 photographic observations of 31 protected species of fungi were obtained, new locations were discovered for 18 species, some rare species were revealed as new for the region, new information about ecology and phenology was obtained. All data were considered in the released second edition of the Red Data Book. The results of the work continued in 2022 and also planned for the future will be taken into account in the next third edition of the book. To achieve better results, it is necessary to organize a systematic approach to monitoring in iNaturalist, providing the active involvement of amateurs and biologists in photo documentation and identification of fungi finds, as well as the development of special methods for obtaining the most informative photo observations. All this, together with traditional methods of biodiversity research, will contribute to displaying an adequate picture of the distribution and occurrence of rare fungal species in the region.
利用现代信息技术方法监测受保护菌种
智能互联网资源的出现和电子移动设备的改进已被证明对执行各种科学应用任务非常有用,例如,记录自然界的生物观察。最重要的是积累生物多样性信息并向所有人提供信息的开放获取在线平台,例如:全球生物多样性信息设施、生物多样性遗产图书馆、生物材料多功能网络存储国家生物系统存托库“诺亚方舟”等。特别令人感兴趣的是资源,一方面是收集生物多样性科学数据的平台,另一方面是收集和分析这些数据的人之间的交流手段,包括经常以“公民科学”的形式出现的项目,例如:蘑菇观察者[Wilson, Hollinger等人,2006-present],自然主义者[iNaturalist, 2022]。最受自然爱好者欢迎的资源是iNaturalist [iNaturalist, 2022],它基于绘制和共享世界各地生物多样性观测的概念。目前,iNaturalist还不能被认为是野外真菌鉴定的一个很好的移动工具,也不能被认为是在专家帮助下根据照片进行鉴定的可靠方法,因为在大多数情况下,准确鉴定需要许多不同的特征(包括微观结构),而果体照片显然是不够的。尽管如此,该程序可以成功地用于真菌研究中的某些任务[Filippova et al., 2022;希恩,2021]。哪些真菌研究任务可以用自然主义者的平台来完成?照片记录和测绘发现。一般来说,它适用于任何种类的真菌。然而,这项任务的实施是最合适的情况下,与罕见的和公认的物种从照片。使用过滤器或在iNaturalist内部组织特殊项目,在任何指定区域对指定物种组进行观察,例如图拉州的真菌[Funga, 2021], FunDiS西海岸稀有真菌挑战[FunDiS, 2021]。通过业余博物学家的活动,以及让学生、学童和他们的父母张贴数据和讨论发现,揭示新物种的位置。根据获得的发现坐标组织标本收集。由于有了新地点的数据,组织学生或学童到“热点”进行特别探险或让业余爱好者收集标本变得容易。作为发现、游览路线、样地地学描述的数据库,以及一种“凭单”照片的存储库监测从照片中确定的物种的子实体外观(物候学)INATURALIST如何用于监测红皮书中包括的物种?可以评估哪些指标?稀有物种的摄影观察数目。观察到的稀有物种总数。在野外和照片中对不同物种的“可观察性识别”水平(以及监测的可能性)。区域人口的空间分布。丰富的子实体。结果物候学。发现物的生态和生境状况(后者可通过收集点的偏远程度和周围环境间接评估;例如,如果测点位于难以到达的森林深处,那么该物种的种群很有可能得到很好的保存[Aurantiporus, 2022]。可以参与保护物种发现登记的观察员数目,包括永久观察员和热心观察员。以下是2021年植被季节使用iNaturalist对图拉州受保护物种进行监测的结果:1)收到了约130张受保护蘑菇物种的照片观测;2)《图拉州红皮书》[2010]收录的观测物种总数为31种。其中大部分的信息被纳入GBIF;3)发现18种新保护物种;4)获得了有关珍稀物种生境的新信息;5)在该地区发现了以前没有记录的稀有物种,它们是下一版红皮书的候选物种(如lycoperdonmammiformme Pers)。[番茄,2022],Holwayamucida (Schulzer) Korf Abawi [Holwaya, 2022];26名观察员记录了珍稀菌种的发现。基于inaturalist平台组织了专题项目《图拉州红皮书真菌》。 结论利用iNaturalist知识分子在线平台作为真菌生物多样性研究的现代工具,有助于解决摄影、制图、物候和生态数据积累方面的一些重要任务,并吸引广泛的业余爱好者来学习和研究真菌。根据第一次经验,可以肯定地说,最重要和最可靠的数据来自于对稀有和受保护真菌物种的监测,该监测是在iNaturalist平台上组织的“红皮书-图拉州真菌[2021]”项目的一部分。在《图拉州红皮书:地衣与真菌》第二版[2021]出版前的2021年一个季节,对31种保护真菌进行了130余次摄影观测,发现了18种新位置,发现了部分本地区罕见的新物种,获得了生态学和物候学方面的新信息。所有数据均纳入已发布的第二版《红色数据手册》。这项工作的结果将在2022年继续进行,并将在未来的第三版中得到考虑。为了取得更好的结果,有必要组织一个系统的监测方法,使业余爱好者和生物学家积极参与真菌发现的照片记录和鉴定,以及开发获得最翔实的照片观察的特殊方法。所有这些,加上传统的生物多样性研究方法,将有助于充分展示该地区稀有真菌物种的分布和发生情况。
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