U-shaped Transformers for 3D Lung Cancer Segmentation

H. K. Bhat, Aashish Mukund, S. Nagaraj, R. Prakash
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Abstract

3-Dimensional (3D) image segmentation in medical images is essential for early detection and diagnosis of diseases. It also aids in effective monitoring and treatment preparation. Traditional methods of delineating the image manually requires anatomical knowledge and is error-prone, cumbersome and expensive. Deep learning methods, especially V-shaped Convolutional Neural Network (CNN) architectures have achieved state-of-the-art performance on 2-Dimensional (2D) clinical image data. However, when it comes to 3D medical images, they suffer from anisotropy which is non-homogeneity in all directions. This paper shows that conventional convolution-based networks are insufficient to accurately segment this kind of data and proposes a ‘U-shaped’ transformer-based network, leveraging the self-attention mechanism to achieve better segmentation results. The proposed model outperforms baseline convolution-based models in 3D lung cancer segmentation.
用于肺癌三维分割的u形变形器
医学图像中的三维图像分割对于疾病的早期发现和诊断至关重要。它还有助于有效监测和治疗准备。传统的手工描绘图像的方法需要解剖学知识,而且容易出错、繁琐且昂贵。深度学习方法,特别是v形卷积神经网络(CNN)架构已经在二维(2D)临床图像数据上取得了最先进的性能。然而,当涉及到三维医学图像时,它们受到各向异性的影响,即各个方向上的非均匀性。本文指出传统的基于卷积的网络不足以准确分割这类数据,并提出了一种基于“u”型变压器的网络,利用自关注机制获得更好的分割结果。该模型在肺癌三维分割中优于基于基线卷积的模型。
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