Molecular Identification of Grouper Fish (Perciformes: Serranidae) Landed From Pangpang Bay, Banyuwangi

Firdha Farah Pramesti, L. Sulmartiwi, S. Andriyono
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Abstract

The Pangpang Bay Banyuwangi has a high potential for fisheries, processing and capturing fisheries, especially the order Perciformes of the families Carangidae, Lutjanidae and Serranidae. Grouper (Serranidae) is one of the high-economic marine fish commodities. However, the grouper fishing data in this area is only known as grouper without knowing the type of species. It is challenging to identify grouper species because groupers have a high degree of morphological similarity and colour variation. Therefore, molecular identification is necessary to determine the type of grouper in this region. This study aims to identify the grouper species that landed from Pangpang Bay based on DNA barcoding. In addition, phylogenetic tree analysis between grouper species (Serranidae) was carried out, and genetic distance analysis of the identified species was compared to the NCBI database. Morphological observations on groupers were carried out first, and fish meat samples were taken for experiments on molecular identification. The results of molecular-based identification revealed two grouper species Epinephelus coioides and Cephalopholis miniata. The results of phylogenetic tree reconstruction of the two groupers form a separate clade. The genetic distance between Epinephelus coioides ranged from 0.00-0.122, while the species of Cephalopholis miniata had a genetic distance of 0.00-0.002.
番禺旺岛胖胖湾石斑鱼的分子鉴定(表演目:鲈科)
Pangpang Bay Banyuwangi在渔业、加工和捕捞渔业方面具有很高的潜力,特别是鱼目Carangidae、Lutjanidae和Serranidae。石斑鱼(Serranidae)是一种高经济的海洋鱼类商品。然而,该地区的石斑鱼捕捞数据只知道石斑鱼,而不知道物种的类型。由于石斑鱼具有高度的形态相似性和颜色差异,因此鉴定石斑鱼物种具有挑战性。因此,对该区石斑鱼的种类进行分子鉴定是十分必要的。本研究旨在利用DNA条形码技术对从胖胖湾上岸的石斑鱼进行物种鉴定。此外,对石斑鱼科(Serranidae)种间进行系统发育树分析,并与NCBI数据库进行遗传距离分析。首先对石斑鱼进行形态学观察,并采集鱼肉标本进行分子鉴定实验。分子鉴定结果显示石斑鱼属石斑鱼属(Epinephelus coioides)和石斑鱼属(Cephalopholis miniata)。两种石斑鱼的系统发育树重建结果形成一个独立的分支。Epinephelus coioides的遗传距离为0.000 ~ 0.122,Cephalopholis miniata的遗传距离为0.000 ~ 0.002。
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