Estimation of Genetic Diversity among Canola Accessions using Simple Sequence Repeat Markers

Jaleel Ahmad, M. Baber, Wajid Nazeer, Sana Hamdullah, Aleena Ahmad Somroo
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引用次数: 1

Abstract

Genetic studies through molecular markers proved important to find out the genetic diversity of canola. In this study, 50 lines of canola were used to find the polymorphism using 15 SSR primers and investigated the genetic diversity, PIC values, frequency-based genetic distance, and allelic frequencies. Mean gene diversity, frequency-based genetic distance, and PIC values were 0.8777, 0.233 and 0.8666, respectively for the canola lines. A good range of genetic diversity was found among studied canola lines with value 85.91% polymorphism. Maximum and minimum genetic distances among 50 lines were 1 and 0.26, respectively. Accessions ACC-26068, ACC-24241, ACC-24244, ACC-24233, ACC-24423 and ACC-24224 have maximum genetic distance. Accessions ACC-24879 and ACC-24169 had minimum genetic distance i.e., 0.26. Dendrogram based on genetic distances showed four main clusters that were further dividing into several sub-clusters. The primers utilized in the present study, were valuable to identify different accessions of canola to find the variability present. This variability will be helpful to initiate the breeding program with their molecular genetic basis.
利用简单序列重复标记估计油菜种质遗传多样性
利用分子标记技术进行遗传研究对了解油菜的遗传多样性具有重要意义。以50份油菜籽为材料,利用15条SSR引物进行多态性分析,并对其遗传多样性、PIC值、基于频率的遗传距离和等位基因频率进行了分析。油菜系的平均基因多样性、频率遗传距离和PIC值分别为0.8777、0.233和0.8666。油菜系间遗传多样性较好,多态性值为85.91%。50个品系间的最大遗传距离为1,最小遗传距离为0.26。ACC-26068、ACC-24241、ACC-24244、ACC-24233、ACC-24423和ACC-24224遗传距离最大。ACC-24879和ACC-24169的遗传距离最小,为0.26。基于遗传距离的树状图显示出4个主要簇,并进一步划分为几个亚簇。在本研究中使用的引物,是有价值的,以确定不同的油菜品种的变异存在。这种变异将有助于利用其分子遗传基础启动育种计划。
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